RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 SLC38A8A6NNN8 435 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 RHPN2P1A8MT19 583 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 NARSO43776 548 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 CTSOP43234 321 aaPredicted RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 HMGCS1Q01581 520 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 MAB21L1Q13394 359 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 SFT2D3Q587I9 215 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 ANKRD26P1Q6NSI1 321 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 TMPRSS9Q7Z410 1059 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 GEMIN6Q8WXD5 167 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 DTLQ9NZJ0 730 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 SLC7A8Q9UHI5 535 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 A8MUA0 341 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 UBXN7O94888 489 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 HLA-DQB2P05538 268 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 HSDL1Q3SXM5 330 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 TFB2MQ9H5Q4 396 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 NDUFS4O43181 175 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 NIPSNAP2O75323 286 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 POP4O95707 220 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 RAB36O95755 333 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 CSKP41240 450 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 PSMA6P60900 246 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 PUS10Q3MIT2 529 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 RPS27LQ71UM5 84 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 CEP68Q76N32 757 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 PYCR2Q96C36 320 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 ABCB8Q9NUT2 735 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 RPS3AP61247 264 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 TMEM17Q86X19 198 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 AKAP1Q92667 903 aaKnown RBP eCLIP16.31■□□□□ 0.2
SATB1-201ENST00000338745 NOP16Q9Y3C1 178 aaKnown RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 A0A1W2PRQ8 180 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 NEMP2A6NFY4 417 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 PBX3P40426 434 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 ZNF641Q96N77 438 aaPredicted RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 BEX2Q9BXY8 128 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 BEX1Q9HBH7 125 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 SMURF1Q9HCE7 757 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 FLRT1Q9NZU1 646 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 WDR37Q9Y2I8 494 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 ROBO1Q9Y6N7 1651 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 SIX3O95343 332 aaPredicted RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 SOX14O95416 240 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 CHRM1P11229 460 aaPredicted RBP16.31■□□□□ 0.2
SATB1-201ENST00000338745 CYP1B1Q16678 543 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 SLC38A3Q99624 504 aa16.31■□□□□ 0.2
SATB1-201ENST00000338745 KHNYNO15037 678 aaKnown RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 CD2P06729 351 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 DSC3Q14574 896 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 OR4F3Q6IEY1 312 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 HMBOX1Q6NT76 420 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ARL14EPQ8N8R7 260 aaPredicted RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 PNLDC1Q8NA58 520 aaKnown RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 OR5J2Q8NH18 312 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 PRNPP04156 253 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 SMSP52788 366 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 FKBP1CQ5VVH2 108 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 TMEM80Q96HE8 168 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 DGAT2Q96PD7 388 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 SLC30A2Q9BRI3 323 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ST14Q9Y5Y6 855 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 IFT172Q9UG01 1749 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 TAS2R39P59534 338 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 RHDQ02161 417 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 C14orf166Q9Y224 244 aaKnown RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 MROH1Q8NDA8 1641 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 LCN1P31025 176 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ARSIQ5FYB1 569 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 FAM43BQ6ZT52 329 aaPredicted RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 ZNF101Q8IZC7 436 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 NUS1Q96E22 293 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 MAGEH1Q9H213 219 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 HEBP2Q9Y5Z4 205 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ZNF8P17098 575 aaPredicted RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 ZNF527Q8NB42 609 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 OR2AG1Q9H205 316 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 HMGXB4Q9UGU5 601 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 PCDHGA11Q9Y5H2 935 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 AXIN1O15169 862 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ALPIP09923 528 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 CYP27C1Q4G0S4 372 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 PAQR3Q6TCH7 311 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 SPATC1Q76KD6 591 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 CD300LFQ8TDQ1 290 aa16.3■□□□□ 0.2
SATB1-201ENST00000338745 ZNF395Q9H8N7 513 aaPredicted RBP16.3■□□□□ 0.2
SATB1-201ENST00000338745 A0A1B0GVM2 712 aa16.29■□□□□ 0.2
SATB1-201ENST00000338745 SLBPQ14493 270 aaKnown RBP eCLIP16.29■□□□□ 0.2
SATB1-201ENST00000338745 ZNF267Q14586 743 aaPredicted RBP16.29■□□□□ 0.2
SATB1-201ENST00000338745 ANKRD23Q86SG2 305 aa16.29■□□□□ 0.2
SATB1-201ENST00000338745 SPPL2BQ8TCT7 592 aa16.29■□□□□ 0.2
SATB1-201ENST00000338745 COL21A1Q96P44 957 aa16.29■□□□□ 0.2
SATB1-201ENST00000338745 CENPMQ9NSP4 180 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms