RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DMRT1Q9Y5R6 373 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 AP4B1Q9Y6B7 739 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 STON1Q9Y6Q2 735 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 UNC13CQ8NB66 2214 aa4.8□□□□□ -1.64
CKS1B-201ENST00000308987 DOCK4Q8N1I0 1966 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 SCN8AQ9UQD0 1980 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 A0A087WV48 116 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 LOC100653049A0A140TA62 436 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 A0A1B0GTW7 788 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CAPN8A6NHC0 703 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM64CA6NLI5 447 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 C10orf142B7Z368 130 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 E9PBE3 544 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 AGRPO00253 132 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TXNDC9O14530 226 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 VILLO15195 856 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 BCAT2O15382 392 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TLX3O43711 291 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 KLHL41O60662 606 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF217O75362 1048 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 KRT34O76011 436 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ANXA9O76027 345 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 STC2O76061 302 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 PDE5AO76074 875 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 PIGNO95427 931 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 IGLV3-19P01714 112 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF883P0CG24 379 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC166P0CW27 439 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ERVK-10P10266 1014 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 HLA-EP13747 358 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF23P17027 643 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ERCC2P18074 760 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 XRCC1P18887 633 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ATP5F1P24539 256 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TTKP33981 857 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 SLC26A3P40879 764 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ALDH3B2P48448 385 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CSNK1EP49674 416 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ACADVLP49748 655 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 NUDT2P50583 147 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 THOP1P52888 689 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MAP3K7CLP57077 242 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 RAC3P60763 192 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 NAA20P61599 178 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 RHDQ02161 417 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 GALNT2Q10471 571 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CEACAM7Q14002 265 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM25Q14258 630 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF234Q14588 700 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 KIF19Q2TAC6 998 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ARL13AQ5H913 290 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TCHHL1Q5QJ38 904 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 OTUD1Q5VV17 481 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 BTBD8Q5XKL5 378 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 FAM45BPQ6NSW5 357 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 NAPRTQ6XQN6 538 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CLEC20AQ6ZU45 233 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 USP53Q70EK8 1073 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TRMT11Q7Z4G4 463 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 RABEPKQ7Z6M1 372 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CMC1Q7Z7K0 106 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 FAM131BQ86XD5 332 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ERI1Q8IV48 349 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CROCCP3Q8IVE0 287 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 DEFB106AQ8N104 65 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF366Q8N895 744 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 DNAAF3Q8N9W5 541 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CCNYQ8ND76 341 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 OR52K1Q8NGK4 314 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 B4GALNT2Q8NHY0 566 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 FAM45AQ8TCE6 357 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MAPK15Q8TD08 544 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MIPOL1Q8TD10 442 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 SLC2A14Q8TDB8 520 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 SETD7Q8WTS6 366 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZUFSPQ96AP4 578 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CCDC124Q96CT7 223 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 VPS39Q96JC1 886 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF597Q96LX8 424 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TEKT5Q96M29 485 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 BIRC8Q96P09 236 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 AGAP3Q96P47 875 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CATSPER2Q96P56 530 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 OR52B2Q96RD2 323 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MRPL57Q9BQC6 102 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM62Q9BVG3 475 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MRPL1Q9BYD6 325 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 YTHDF1Q9BYJ9 559 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CAAP1Q9H8G2 361 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 EML4Q9HC35 981 aaKnown RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 CNGB3Q9NQW8 809 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 TM7SF3Q9NS93 570 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 C20orf96Q9NUD7 363 aaPredicted RBP4.79□□□□□ -1.64
CKS1B-201ENST00000308987 FAM49BQ9NUQ9 324 aa4.79□□□□□ -1.64
CKS1B-201ENST00000308987 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms