RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 IGFALSP35858 605 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 PLIN5Q00G26 463 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 FOLH1Q04609 750 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SFSWAPQ12872 951 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 CYP51A1Q16850 503 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 ARMCX6Q7L4S7 300 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 TICAM1Q8IUC6 712 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 DENND6BQ8NEG7 585 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 GTF2H4Q92759 462 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 APIPQ96GX9 242 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 FCRL1Q96LA6 429 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 APOLD1Q96LR9 279 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 C1QTNF7Q9BXJ2 289 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 SEMA6AQ9H2E6 1030 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 ITM2CQ9NQX7 267 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 USP36Q9P275 1121 aaKnown RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.85□□□□□ -0.99
PDPN-201ENST00000294489 SLC23A2Q9UGH3 650 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 MAGEL2Q9UJ55 1249 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 RAB26Q9ULW5 256 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 DLGAP4Q9Y2H0 992 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 TMEM98Q9Y2Y6 226 aa8.85□□□□□ -0.99
PDPN-201ENST00000294489 CHURC1-FNTBB4DL54 471 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 TIPRLO75663 272 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 MYO1DO94832 1006 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 FUCA1P04066 466 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 PNLIPRP1P54315 467 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 MTPNP58546 118 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 MAP7Q14244 749 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 CACUL1Q86Y37 369 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 TNIP2Q8NFZ5 429 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 OR9A1PQ8NGU1 263 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 RPLP0P6Q8NHW5 317 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 ZNF480Q8WV37 535 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 NUDT8Q8WV74 236 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 FAM3CQ92520 227 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 REPS1Q96D71 796 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 METTL2AQ96IZ6 378 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 TSSK3Q96PN8 268 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 OR4K3Q96R72 315 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 TIMM29Q9BSF4 260 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 THUMPD3Q9BV44 507 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 OSBPL6Q9BZF3 934 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 WDR26Q9H7D7 661 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 SGK2Q9HBY8 427 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 DYRK1BQ9Y463 629 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 PCDHB3Q9Y5E6 796 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 ERN1O75460 977 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 CEACAM5P06731 702 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 UBTFL6P0CB48 400 aaPredicted RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 MTHFD1P11586 935 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 FCGR1AP12314 374 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 SDC1P18827 310 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 NDUFV2P19404 249 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 CD22P20273 847 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 FASP25445 335 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 KIAA1024LP59773 190 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 TSTA3Q13630 321 aaPredicted RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 DDX39BQ13838 428 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 NFE2L1Q14494 772 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 CAPRIN2Q6IMN6 1127 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 NOXRED1Q6NXP6 359 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 ERMP1Q7Z2K6 904 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 AMZ2Q86W34 360 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 GALNT4Q8N4A0 578 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 OR14C36Q8NHC7 312 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 WDR20Q8TBZ3 569 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 TESCQ96BS2 214 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 SIPA1Q96FS4 1042 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 MTERF1Q99551 399 aaKnown RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 MENTQ9BUN1 341 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 PIF1Q9H611 641 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 BRF2Q9HAW0 419 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 PHPT1Q9NRX4 125 aaPredicted RBP8.84□□□□□ -0.99
PDPN-201ENST00000294489 VAPAQ9P0L0 249 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 DLGAP2Q9P1A6 1054 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 PLXND1Q9Y4D7 1925 aa8.84□□□□□ -0.99
PDPN-201ENST00000294489 H0YJX3 145 aa8.83□□□□□ -1
PDPN-201ENST00000294489 PAK4O96013 591 aaPredicted RBP8.83□□□□□ -1
PDPN-201ENST00000294489 GABRG2P18507 467 aa8.83□□□□□ -1
PDPN-201ENST00000294489 PRPS1L1P21108 318 aa8.83□□□□□ -1
PDPN-201ENST00000294489 TBPL1P62380 186 aa8.83□□□□□ -1
PDPN-201ENST00000294489 ACSM2AQ08AH3 577 aa8.83□□□□□ -1
PDPN-201ENST00000294489 SGCGQ13326 291 aa8.83□□□□□ -1
PDPN-201ENST00000294489 TDGQ13569 410 aa8.83□□□□□ -1
PDPN-201ENST00000294489 FXNQ16595 210 aa8.83□□□□□ -1
PDPN-201ENST00000294489 DPY19L1Q2PZI1 675 aa8.83□□□□□ -1
PDPN-201ENST00000294489 PLA2G4EQ3MJ16 856 aa8.83□□□□□ -1
PDPN-201ENST00000294489 ACSM2BQ68CK6 577 aa8.83□□□□□ -1
PDPN-201ENST00000294489 GLYATQ6IB77 296 aa8.83□□□□□ -1
PDPN-201ENST00000294489 DOK6Q6PKX4 331 aa8.83□□□□□ -1
PDPN-201ENST00000294489 AMIGO2Q86SJ2 522 aa8.83□□□□□ -1
PDPN-201ENST00000294489 GPR180Q86V85 440 aa8.83□□□□□ -1
PDPN-201ENST00000294489 SYT12Q8IV01 421 aa8.83□□□□□ -1
PDPN-201ENST00000294489 ITCHQ96J02 903 aa8.83□□□□□ -1
PDPN-201ENST00000294489 NSMCE2Q96MF7 247 aa8.83□□□□□ -1
PDPN-201ENST00000294489 SPATA6Q9NWH7 488 aaPredicted RBP8.83□□□□□ -1
PDPN-201ENST00000294489 ANAPC2Q9UJX6 822 aa8.83□□□□□ -1
PDPN-201ENST00000294489 RUVBL1Q9Y265 456 aaKnown RBP8.83□□□□□ -1
PDPN-201ENST00000294489 ASF1AQ9Y294 204 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms