RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 POU2F3Q9UKI9 436 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 EIF3LQ9Y262 564 aaKnown RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 COMMD10Q9Y6G5 202 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 A0A1B0GTL3 188 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 OR2A25A4D2G3 310 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 AGAP5A6NIR3 686 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 E9PAM4 449 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 H0Y626 953 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CXCR6O00574 342 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 AXIN1O15169 862 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 TRIM16O95361 564 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 RHOQP17081 205 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 NFKBIAP25963 317 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MASP1P48740 699 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CYP4F3Q08477 520 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 EFEMP1Q12805 493 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MAD2L1Q13257 205 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 DNASE1L3Q13609 305 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 UBXN2BQ14CS0 331 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 RUNDC3AQ59EK9 446 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MLIPQ5VWP3 458 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 CYP20A1Q6UW02 462 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ENPP6Q6UWR7 440 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MIB1Q86YT6 1006 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF683Q8IZ20 524 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 OR4L1Q8NH43 312 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 SLC38A4Q969I6 547 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 LGALS12Q96DT0 336 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 FCRL2Q96LA5 508 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 PPP3R2Q96LZ3 170 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 SNX18Q96RF0 628 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 APOL4Q9BPW4 351 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ACOT13Q9NPJ3 140 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 SEMA4BQ9NPR2 832 aaPredicted RBP10.04□□□□□ -0.8
UPF3B-201ENST00000276201 TMEM248Q9NWD8 314 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ERVK-18Q9QC07 812 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 KLQ9UEF7 1012 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 ANKRD12Q6UB98 2062 aa10.04□□□□□ -0.8
UPF3B-201ENST00000276201 MAN2B1O00754 1011 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 RGS10O43665 173 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 CD86P42081 329 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 CASP3P42574 277 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 TEKQ02763 1124 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PCBP2Q15366 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PCSK7Q16549 785 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF404Q494X3 552 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MARC1Q5VT66 337 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 FAM219BQ5XKK7 198 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 ALG1LQ6GMV1 187 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 CPA6Q8N4T0 437 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 FNDC5Q8NAU1 212 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 GALNT6Q8NCL4 622 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MCFD2Q8NI22 146 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 FAM3CQ92520 227 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 GTF2H4Q92759 462 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 EXT2Q93063 718 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MSANTD3Q96H12 275 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 TBATAQ96M53 351 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 ZBTB18Q99592 522 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 NT5MQ9NPB1 228 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 NUDT4Q9NZJ9 180 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MARCH2Q9P0N8 246 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 RAPGEFL1Q9UHV5 662 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 ZNF229Q9UJW7 825 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 CRYL1Q9Y2S2 319 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MED16Q9Y2X0 877 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SIT1Q9Y3P8 196 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 TIMM22Q9Y584 194 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 FAM170BA6NMN3 283 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 E2F3O00716 465 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SNPHO15079 494 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 LSM1O15116 133 aaKnown RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 HS6ST1O60243 411 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 STC2O76061 302 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SLC4A1P02730 911 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 CYP17A1P05093 508 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 DCNP07585 359 aaKnown RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 AKT1P31749 480 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 GZMMP51124 257 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 MTPNP58546 118 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PIGFQ07326 219 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 IL10RBQ08334 325 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 FZD5Q13467 585 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 RAPSNQ13702 412 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SEMA3AQ14563 771 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PON2Q15165 354 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 KDM4DQ6B0I6 523 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SPESP1Q6UW49 350 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 HTR3DQ70Z44 454 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 TSPYL5Q86VY4 417 aaPredicted RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 BBS7Q8IWZ6 715 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 SLC13A3Q8WWT9 602 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PPM1MQ96MI6 270 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 ALOXE3Q9BYJ1 711 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 OLA1Q9NTK5 396 aaKnown RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 PLCXD1Q9NUJ7 323 aa10.03□□□□□ -0.8
UPF3B-201ENST00000276201 NLE1Q9NVX2 485 aaPredicted RBP10.03□□□□□ -0.8
UPF3B-201ENST00000276201 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms