RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR2A25A4D2G3 310 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 TP73O15350 636 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ALOX12BO75342 701 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 EIF2S1P05198 315 aaKnown RBP16.96■□□□□ 0.31
PNKP-230ENST00000638016 FOLR3P41439 243 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ELK3P41970 407 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 OR1D4P47884 311 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 CARSP49589 748 aaKnown RBP16.96■□□□□ 0.31
PNKP-230ENST00000638016 ITGA8P53708 1063 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 PNLIPRP1P54315 467 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 SNRPNP63162 240 aaKnown RBP16.96■□□□□ 0.31
PNKP-230ENST00000638016 DR1Q01658 176 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 KLRB1Q12918 225 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 TTLL9Q3SXZ7 439 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ZC3H12BQ5HYM0 836 aaKnown RBP16.96■□□□□ 0.31
PNKP-230ENST00000638016 MBOAT1Q6ZNC8 495 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 SHISA6Q6ZSJ9 500 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 RNF44Q7L0R7 432 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 CALML6Q8TD86 181 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ASB11Q8WXH4 323 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 SMPDL3AQ92484 453 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 INPP5DQ92835 1189 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ZUFSPQ96AP4 578 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 MESP1Q9BRJ9 268 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 DHRS4Q9BTZ2 278 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 CLMPQ9H6B4 373 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 CTSFQ9UBX1 484 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 ADAMTS6Q9UKP5 1117 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 SAR1BQ9Y6B6 198 aa16.96■□□□□ 0.31
PNKP-230ENST00000638016 TARM1B6A8C7 271 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 DSCR3O14972 297 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 STATHP02808 62 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 MPC1LP0DKB6 136 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 IMPA1P29218 277 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 CMPK1P30085 196 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 RPA3P35244 121 aaPredicted RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 CSRP3P50461 194 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 MLLT10P55197 1068 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 KCNC4Q03721 635 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 FASTKD3Q14CZ7 662 aaKnown RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 NADK2Q4G0N4 442 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 SPANXN3Q5MJ09 141 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 HIBCHQ6NVY1 386 aaPredicted RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 FBXO42Q6P3S6 717 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 NEK10Q6ZWH5 1172 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 PPP1R32Q7Z5V6 425 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 ANKMY2Q8IV38 441 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 LMNTD2Q8IXW0 634 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 TEX19Q8NA77 164 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 OR2Y1Q8NGV0 311 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 CERS2Q96G23 380 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 MLXIPLQ9NP71 852 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 MRPS30Q9NP92 439 aaKnown RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 FAM114A2Q9NRY5 505 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 CUEDC1Q9NWM3 386 aaPredicted RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 LUZP4Q9P127 313 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 ZC3H7BQ9UGR2 993 aaKnown RBP16.95■□□□□ 0.3
PNKP-230ENST00000638016 SH2B3Q9UQQ2 575 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 PLAAQ9Y263 795 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 KLK4Q9Y5K2 254 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 NUP210LQ5VU65 1888 aa16.95■□□□□ 0.3
PNKP-230ENST00000638016 DOCK10Q96BY6 2186 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 FITM1A5D6W6 292 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 E7ENX8 843 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 GFYI3L273 518 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 FFAR3O14843 346 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 GPR42O15529 346 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 VPS26AO75436 327 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 CEACAM4O75871 244 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 AHSGP02765 367 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 PGDP52209 483 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 TAP2Q03519 686 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 GRM7Q14831 915 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 ICE2Q659A1 982 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 PAQR3Q6TCH7 311 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
PNKP-230ENST00000638016 PCGF5Q86SE9 256 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 PAQR7Q86WK9 346 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 RAB43Q86YS6 212 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 PLD3Q8IV08 490 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 CNTN4Q8IWV2 1026 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 EEF1AKMT1Q8WVE0 214 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 ANP32BQ92688 251 aaKnown RBP16.94■□□□□ 0.3
PNKP-230ENST00000638016 C10orf90Q96M02 699 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 KRT12Q99456 494 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 SPSB2Q99619 263 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 ZFYVE21Q9BQ24 234 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 PLCD4Q9BRC7 762 aa16.94■□□□□ 0.3
PNKP-230ENST00000638016 SOX17Q9H6I2 414 aaPredicted RBP16.94■□□□□ 0.3
PNKP-230ENST00000638016 TRMT6Q9UJA5 497 aaKnown RBP16.94■□□□□ 0.3
PNKP-230ENST00000638016 HYKKA2RU49 373 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 H0YGG7 62 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 SMAPO00193 183 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 SEC31AO94979 1220 aaKnown RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 FKBP9O95302 570 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 ENO3P13929 434 aaPredicted RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 ARSFP54793 590 aa16.93■□□□□ 0.3
PNKP-230ENST00000638016 ARF3P61204 181 aaPredicted RBP16.93■□□□□ 0.3
PNKP-230ENST00000638016 SSPNQ14714 243 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms