RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 PPP1R32Q7Z5V6 425 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 ZADH2Q8N4Q0 377 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 METTL27Q8N6F8 245 aaPredicted RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 COL26A1Q96A83 441 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 CABS1Q96KC9 395 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 FAM167BQ9BTA0 163 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 DPH7Q9BTV6 452 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 SOX17Q9H6I2 414 aaPredicted RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 FBXO6Q9NRD1 293 aaPredicted RBP17.15■□□□□ 0.34
PNKP-225ENST00000636214 KLK4Q9Y5K2 254 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 COMMD10Q9Y6G5 202 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 MAU2Q9Y6X3 613 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 HEATR5BQ9P2D3 2071 aa17.15■□□□□ 0.34
PNKP-225ENST00000636214 FITM1A5D6W6 292 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 MYO1CO00159 1063 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 KIF5CO60282 957 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 PSIP1O75475 530 aaKnown RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 ENO3P13929 434 aaPredicted RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 GCGRP47871 477 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 OR1D4P47884 311 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 PNLIPRP1P54315 467 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 FASTKQ14296 549 aaKnown RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 NKG7Q16617 165 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 CYP1B1Q16678 543 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 FHL5Q5TD97 284 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 THEMIS2Q5TEJ8 643 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 PRMT9Q6P2P2 845 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 SUSD1Q6UWL2 747 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 RNF44Q7L0R7 432 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 ADCK2Q7Z695 626 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 REXO1L1PQ8IX06 675 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 IQCKQ8N0W5 287 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 RBMXL3Q8N7X1 1067 aaKnown RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 OR2A1Q8NGT9 310 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 KCNJ9Q92806 393 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 RERGQ96A58 199 aaPredicted RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 ZNF285Q96NJ3 590 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 TRIM56Q9BRZ2 755 aaKnown RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 ILKAPQ9H0C8 392 aaPredicted RBP17.14■□□□□ 0.33
PNKP-225ENST00000636214 SLC26A1Q9H2B4 701 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 ZNF304Q9HCX3 659 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 SEMA3GQ9NS98 782 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 SLC22A11Q9NSA0 550 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 ABCF3Q9NUQ8 709 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 FBXL4Q9UKA2 621 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 MAP4K5Q9Y4K4 846 aa17.14■□□□□ 0.33
PNKP-225ENST00000636214 RELNP78509 3460 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 USP9XQ93008 2570 aaPredicted RBP17.13■□□□□ 0.33
PNKP-225ENST00000636214 A0A1W2PPV9 198 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 PRPF4O43172 522 aaKnown RBP eCLIP17.13■□□□□ 0.33
PNKP-225ENST00000636214 ZBTB14O43829 449 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 AGFG2O95081 481 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 ONECUT2O95948 504 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 GNLYP22749 145 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SLC1A2P43004 574 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 CARSP49589 748 aaKnown RBP17.13■□□□□ 0.33
PNKP-225ENST00000636214 CLCN7P51798 805 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 FOXL2P58012 376 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 CTBP1Q13363 440 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 CUL1Q13616 776 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 PTK6Q13882 451 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 TUBB8Q3ZCM7 444 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 FRMPD2BQ6IN97 320 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 UGT3A1Q6NUS8 523 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SHISA6Q6ZSJ9 500 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 DENND6AQ8IWF6 608 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SLC35F6Q8N357 371 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.13■□□□□ 0.33
PNKP-225ENST00000636214 ACTRT1Q8TDG2 376 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.13■□□□□ 0.33
PNKP-225ENST00000636214 MIEF2Q96C03 454 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 OSBPL9Q96SU4 736 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 PKP4Q99569 1192 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SLC6A20Q9NP91 592 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 KLHL42Q9P2K6 505 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 CTSFQ9UBX1 484 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 ZNF282Q9UDV7 671 aaPredicted RBP17.13■□□□□ 0.33
PNKP-225ENST00000636214 ASIC3Q9UHC3 531 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 TAC3Q9UHF0 121 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 CDC14AQ9UNH5 594 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 NUP210LQ5VU65 1888 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 SHANK1Q9Y566 2161 aa17.13■□□□□ 0.33
PNKP-225ENST00000636214 USP9YO00507 2555 aaPredicted RBP17.12■□□□□ 0.33
PNKP-225ENST00000636214 ZCWPW2A0A1B0GU75 182 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 OR2A25A4D2G3 310 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 MPC1LP0DKB6 136 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 ERGP11308 486 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 FBLP22087 321 aaKnown RBP17.12■□□□□ 0.33
PNKP-225ENST00000636214 UQCRFS1P47985 274 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 PRAMEF13Q5VWM6 474 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 KCNMB4Q86W47 210 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 PALM2Q8IXS6 379 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 INPP5DQ92835 1189 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 SPSB2Q99619 263 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 PLCD4Q9BRC7 762 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 CRB3Q9BUF7 120 aa17.12■□□□□ 0.33
PNKP-225ENST00000636214 YIPF2Q9BWQ6 316 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms