RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 PTPN6P29350 595 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 DNAJA1P31689 397 aaKnown RBP10.4□□□□□ -0.74
PSPC1-207ENST00000635251 MAGEA2P43356 314 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 CSNK1DP48730 415 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 RELAQ04206 551 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 LMAN2Q12907 356 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 DGCR6Q14129 220 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 ACOX1Q15067 660 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 DUOXA1Q1HG43 343 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 VMACQ2NL98 169 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 GGTA1PQ4G0N0 100 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 CDKL4Q5MAI5 379 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 NIPAL1Q6NVV3 410 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 NOXRED1Q6NXP6 359 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 TPRG1Q6ZUI0 275 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 CYP2U1Q7Z449 544 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 GALNT10Q86SR1 603 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 ADCK1Q86TW2 530 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 SERPINA11Q86U17 422 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 TRIM74Q86UV6 250 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 TRIM73Q86UV7 250 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 CHPFQ8IZ52 775 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 RNF175Q8N4F7 328 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 TTC29Q8NA56 475 aaPredicted RBP10.4□□□□□ -0.74
PSPC1-207ENST00000635251 ZNF540Q8NDQ6 660 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 OR2AP1Q8NGE2 309 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 CSGALNACT1Q8TDX6 532 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 VN1R3Q9BXE9 311 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 SLC12A9Q9BXP2 914 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 WDR12Q9GZL7 423 aaKnown RBP10.4□□□□□ -0.74
PSPC1-207ENST00000635251 REXO4Q9GZR2 422 aaKnown RBP10.4□□□□□ -0.74
PSPC1-207ENST00000635251 GABARAPL1Q9H0R8 117 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 ATG10Q9H0Y0 220 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 IL1RAPQ9NPH3 570 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 DNAJC11Q9NVH1 559 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 SLC22A14Q9Y267 594 aa10.4□□□□□ -0.74
PSPC1-207ENST00000635251 KCNE1BA0A087WTH5 132 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 SOBPA7XYQ1 873 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 KPNA4O00629 521 aaPredicted RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 SLC22A1O15245 554 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 FAM20BO75063 409 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 GABARAPO95166 117 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 FADS2O95864 444 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 COX7A2P14406 83 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CYP2A7P20853 494 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 FPR1P21462 350 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CDH3P22223 829 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ALDH4A1P30038 563 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 IDUAP35475 653 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CLK3P49761 638 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 EPHB3P54753 998 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 PTPN5P54829 565 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 SNRPD1P62314 119 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ZXDBP98169 803 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 B4GALNT1Q00973 533 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CBX3Q13185 183 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CHIT1Q13231 466 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 KEAP1Q14145 624 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 DGKKQ5KSL6 1271 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 TPGS2Q68CL5 300 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 NEK5Q6P3R8 708 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 USP45Q70EL2 814 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ZNF551Q7Z340 670 aaPredicted RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ADAMTS19Q8TE59 1207 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 IGSF21Q96ID5 467 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 MYOCQ99972 504 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 BBS2Q9BXC9 721 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ARMC7Q9H6L4 198 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 KRT84Q9NSB2 600 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 TRNAU1APQ9NX07 287 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 ABT1Q9ULW3 272 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 CLEC4EQ9ULY5 219 aa10.4□□□□□ -0.75
PSPC1-207ENST00000635251 SAMHD1Q9Y3Z3 626 aaKnown RBP10.4□□□□□ -0.75
PSPC1-207ENST00000635251 KRT87PA6NCN2 255 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 MAGEB17A8MXT2 336 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 UPK3BL1B0FP48 263 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 UPK3BL2E5RIL1 263 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 M0QX08 132 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 AXIN1O15169 862 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 NADKO95544 446 aaPredicted RBP10.39□□□□□ -0.75
PSPC1-207ENST00000635251 C1QCP02747 245 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 PRPS1L1P21108 318 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 PRPH2P23942 346 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 AOAHP28039 575 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 CD70P32970 193 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 SERPINB10P48595 397 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 TRPC1P48995 793 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 HNMTP50135 292 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 SP3Q02447 781 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 DDX39BQ13838 428 aaKnown RBP10.39□□□□□ -0.75
PSPC1-207ENST00000635251 DGUOKQ16854 277 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 FRG2Q64ET8 278 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 KDM4DQ6B0I6 523 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 CAPN13Q6MZZ7 669 aaPredicted RBP10.39□□□□□ -0.75
PSPC1-207ENST00000635251 ERICH5Q6P6B1 374 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 Q6ZNB5 142 aa10.39□□□□□ -0.75
PSPC1-207ENST00000635251 RFLNAQ6ZTI6 216 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms