RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 VPS50Q96JG6 964 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 CCDC115Q96NT0 180 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 CHID1Q9BWS9 393 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 FAM83DQ9H4H8 585 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 CAAP1Q9H8G2 361 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 SLC22A14Q9Y267 594 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 MYRFQ9Y2G1 1151 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 COMMD3-BMI1R4GMX3 469 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 VCANP13611 3396 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 TRIOO75962 3097 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 UPK3BL1B0FP48 263 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 UPK3BL2E5RIL1 263 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 KPNA3O00505 521 aaPredicted RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 SLC16A5O15375 505 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 B3GALT4O96024 378 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 LDLRP01130 860 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 SRFP11831 508 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 TIMP2P16035 220 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 PRPH2P23942 346 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 TACR1P25103 407 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 NFKBIAP25963 317 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 HNMTP50135 292 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 NR1H2P55055 460 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 RUNDC3AQ59EK9 446 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 TBPL2Q6SJ96 375 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 MMAAQ8IVH4 418 aaKnown RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 RNF175Q8N4F7 328 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 DDHD1Q8NEL9 900 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 ZFP28Q8NHY6 868 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 OR8D1Q8WZ84 308 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 FAM3CQ92520 227 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 DGCR14Q96DF8 476 aaKnown RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 FBXL20Q96IG2 436 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 OR52E6Q96RD3 313 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 FAM129BQ96TA1 746 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 H2AFJQ9BTM1 129 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 RIOK2Q9BVS4 552 aaKnown RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 ATG10Q9H0Y0 220 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 NTN4Q9HB63 628 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 PRSS16Q9NQE7 514 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 SERHLQ9NQF3 203 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 FAM8A1Q9UBU6 413 aa10.06□□□□□ -0.8
LINC00598-207ENST00000616706 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.06□□□□□ -0.8
LINC00598-207ENST00000616706 UPK1AO00322 258 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CLIC3O95833 236 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 C7P10643 843 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 ZNF23P17027 643 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 HOXB9P17482 250 aaPredicted RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 SDC1P18827 310 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CYP2A7P20853 494 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 DRD1P21728 446 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 KIR2DL1P43626 348 aaPredicted RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 METAP1P53582 386 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CLDN8P56748 225 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PFN3P60673 137 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 NKG7Q16617 165 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 ZNF805Q5CZA5 627 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 TMEM196Q5HYL7 178 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 ENPP6Q6UWR7 440 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 NEK10Q6ZWH5 1172 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CACUL1Q86Y37 369 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PHACTR4Q8IZ21 702 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 C10orf111Q8N326 155 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 TRAM1L1Q8N609 369 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 FIG4Q92562 907 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 FOXJ1Q92949 421 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 APIPQ96GX9 242 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 THUMPD3Q9BV44 507 aaKnown RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PAIP1Q9H074 479 aaKnown RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 ELOVL6Q9H5J4 265 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 C8orf4Q9NR00 106 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 DNAJC11Q9NVH1 559 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 SMPD3Q9NY59 655 aaPredicted RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 NFKBIL1Q9UBC1 381 aaPredicted RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CA14Q9ULX7 337 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PPT2Q9UMR5 302 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 NDRG2Q9UN36 371 aaKnown RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 SNX6Q9UNH7 406 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PLXND1Q9Y4D7 1925 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 C16orf96A6NNT2 1141 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 ARHGEF33A8MVX0 844 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CFAP99D6REC4 459 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PLK4O00444 970 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 KPNA5O15131 536 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CLOCKO15516 846 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PRSS23O95084 383 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 PRNPP04156 253 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 GSTM1P09488 218 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 RAP2AP10114 183 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CD22P20273 847 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 XPAP23025 273 aaPredicted RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 RPS9P46781 194 aaKnown RBP10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CTSCP53634 463 aa10.05□□□□□ -0.8
LINC00598-207ENST00000616706 CDH15P55291 814 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms