RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 ASB11Q8WXH4 323 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 DPH7Q9BTV6 452 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 CLMPQ9H6B4 373 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 MLXIPLQ9NP71 852 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 ENAMQ9NRM1 1142 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 SLC17A6Q9P2U8 582 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 TAC3Q9UHF0 121 aa13.29□□□□□ -0.28
APOC1-208ENST00000592535 PCDHGA9Q9Y5G4 932 aaKnown RBP13.29□□□□□ -0.28
APOC1-208ENST00000592535 LOC105369274A0A096LPK9 316 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 LOC102723532A0A0G2JNH3 316 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 OR2A25A4D2G3 310 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 FITM1A5D6W6 292 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 GFYI3L273 518 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 TTI1O43156 1089 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 SRPX2O60687 465 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 MED26O95402 600 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 CD63P08962 238 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 ELK3P41970 407 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 CARSP49589 748 aaKnown RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 PGDP52209 483 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 TIAL1Q01085 375 aaKnown RBP eCLIP13.28□□□□□ -0.28
APOC1-208ENST00000592535 SSPNQ14714 243 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 MORF4L2Q15014 288 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 RBM20Q5T481 1227 aaKnown RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 YOD1Q5VVQ6 348 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 HIBCHQ6NVY1 386 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 MED25Q71SY5 747 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 METTL27Q8N6F8 245 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 TMEM102Q8N9M5 508 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 TEX19Q8NA77 164 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 FBXO15Q8NCQ5 510 aaPredicted RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 OR2Y1Q8NGV0 311 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 ZNF480Q8WV37 535 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 CERS2Q96G23 380 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 CFAP36Q96G28 342 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 RUNDC3BQ96NL0 473 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 WDR83Q9BRX9 315 aaKnown RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 NAT9Q9BTE0 207 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 MRPS30Q9NP92 439 aaKnown RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 ABCF3Q9NUQ8 709 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 TRMT6Q9UJA5 497 aaKnown RBP13.28□□□□□ -0.28
APOC1-208ENST00000592535 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
APOC1-208ENST00000592535 IGKV1-8A0A0C4DH67 115 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ZNF839A8K0R7 811 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 E7ENX8 843 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 CCDC188H7C350 402 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ZBTB14O43829 449 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 CEACAM4O75871 244 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ONECUT2O95948 504 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 EIF2S1P05198 315 aaKnown RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 UMODP07911 640 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 DEKP35659 375 aaKnown RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 HSD17B2P37059 387 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 SKIV2L2P42285 1042 aaKnown RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 PAFAH1B1P43034 410 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 OR1D4P47884 311 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ITGA8P53708 1063 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 RRADP55042 308 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 TAP2Q03519 686 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 NAA25Q14CX7 972 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ICE2Q659A1 982 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 FBXO42Q6P3S6 717 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 UBE2R2Q712K3 238 aaPredicted RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 COX15Q7KZN9 410 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 OVCH1Q7RTY7 1134 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 PPP1R32Q7Z5V6 425 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 PAQR7Q86WK9 346 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 CNTN4Q8IWV2 1026 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 LRRC56Q8IYG6 542 aaPredicted RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 PDIK1LQ8N165 341 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 FDCSPQ8NFU4 85 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 GABPB2Q8TAK5 448 aaPredicted RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 FKBP10Q96AY3 582 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 PTERQ96BW5 349 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ZFYVE21Q9BQ24 234 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 SYNPO2LQ9H987 977 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 STOX2Q9P2F5 926 aaPredicted RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 ZC3H7BQ9UGR2 993 aaKnown RBP13.27□□□□□ -0.29
APOC1-208ENST00000592535 TENM4Q6N022 2769 aa13.27□□□□□ -0.29
APOC1-208ENST00000592535 HYKKA2RU49 373 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 A6NL46 340 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 H0YGG7 62 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 MASP2O00187 686 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 SMAPO00193 183 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 EIF3FO00303 357 aaPredicted RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 CCNDBP1O95273 360 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 AHSGP02765 367 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 PIM1P11309 404 aaPredicted RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 IMPA1P29218 277 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 CDKN2DP55273 166 aa13.26□□□□□ -0.29
APOC1-208ENST00000592535 ARF3P61204 181 aaPredicted RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 PRDX1Q06830 199 aaKnown RBP13.26□□□□□ -0.29
APOC1-208ENST00000592535 IGFBP7Q16270 282 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms