RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ATRXP46100 2492 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 ASXL3Q9C0F0 2248 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 UQCRHLA0A096LP55 91 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 IGHV5-51A0A0C4DH38 117 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 SLC9B1P1A6NJY1 282 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 UQCRHP07919 91 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 GFAPP14136 432 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 PEBP1P30086 187 aaKnown RBP18.86■□□□□ 0.61
CIRBP-220ENST00000588917 SEPHS1P49903 392 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 PDX1P52945 283 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 ALDH18A1P54886 795 aaKnown RBP18.86■□□□□ 0.61
CIRBP-220ENST00000588917 PPP1CAP62136 330 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 TBPL1P62380 186 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 PTCHD3Q3KNS1 767 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 PRAMEF13Q5VWM6 474 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 ICE2Q659A1 982 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 BPHLQ86WA6 291 aaPredicted RBP18.86■□□□□ 0.61
CIRBP-220ENST00000588917 SRRM1Q8IYB3 904 aaKnown RBP18.86■□□□□ 0.61
CIRBP-220ENST00000588917 KLHDC8AQ8IYD2 350 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 RCBTB1Q8NDN9 531 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 OR2L3Q8NG85 312 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 SLC41A2Q96JW4 573 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 MRPS30Q9NP92 439 aaKnown RBP18.86■□□□□ 0.61
CIRBP-220ENST00000588917 MKS1Q9NXB0 559 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 TMEM216Q9P0N5 145 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 ANKMY1Q9P2S6 941 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 TAC3Q9UHF0 121 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 KLK4Q9Y5K2 254 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 KCNE2Q9Y6J6 123 aa18.86■□□□□ 0.61
CIRBP-220ENST00000588917 FREM2Q5SZK8 3169 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 RP1P56715 2156 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 UBXN8O00124 270 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 KLK8O60259 260 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 STK16O75716 305 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 CAPNS1P04632 268 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 NPPBP16860 134 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 CLDN6P56747 220 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 ACY1Q03154 408 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 THOC6Q86W42 341 aaKnown RBP18.85■□□□□ 0.61
CIRBP-220ENST00000588917 C17orf64Q86WR6 236 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 D2HGDHQ8N465 521 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 FBXO39Q8N4B4 442 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 EXT2Q93063 718 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 ACAT2Q9BWD1 397 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 CD244Q9BZW8 370 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 NRSN2Q9GZP1 204 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 ABCF3Q9NUQ8 709 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 SOHLH2Q9NX45 425 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 XPR1Q9UBH6 696 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 BTRCQ9Y297 605 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 DYRK1BQ9Y463 629 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 ACTL7BQ9Y614 415 aa18.85■□□□□ 0.61
CIRBP-220ENST00000588917 ANKRD11Q6UB99 2663 aaPredicted RBP18.85■□□□□ 0.61
CIRBP-220ENST00000588917 FAM149AA5PLN7 773 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 B4E171 279 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 TAF4O00268 1085 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 PLD2O14939 933 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 MSL3P1P0C860 447 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 JMJD7P0C870 316 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 MTHFD2P13995 350 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 TSPAN7P41732 249 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 SLC6A12P48065 614 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 C16orf72Q14CZ0 275 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 PFKFB4Q16877 469 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 ZC3H12BQ5HYM0 836 aaKnown RBP18.84■□□□□ 0.61
CIRBP-220ENST00000588917 FIGLAQ6QHK4 219 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 PROSER1Q86XN7 944 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 LSMEM2Q8N112 164 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 C4orf33Q8N1A6 199 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 C19orf47Q8N9M1 422 aaKnown RBP18.84■□□□□ 0.61
CIRBP-220ENST00000588917 BANPQ8N9N5 519 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 PYCR2Q96C36 320 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 CCDC126Q96EE4 140 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 ACBD3Q9H3P7 528 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 SSU72Q9NP77 194 aaKnown RBP18.84■□□□□ 0.61
CIRBP-220ENST00000588917 FBXO8Q9NRD0 319 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 TMEM184CQ9NVA4 438 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 CPSF2Q9P2I0 782 aaKnown RBP18.84■□□□□ 0.61
CIRBP-220ENST00000588917 MID2Q9UJV3 735 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 SLC22A14Q9Y267 594 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 LOXL2Q9Y4K0 774 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 PCDHGA8Q9Y5G5 932 aa18.84■□□□□ 0.61
CIRBP-220ENST00000588917 FOXO6A8MYZ6 492 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 STX16-NPEPL1H3BU86 382 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 STX16O14662 325 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 TAPBPO15533 448 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 WDR47O94967 919 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 ST6GAL1P15907 406 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 GNAZP19086 355 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 GRIA3P42263 894 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 MLLT3P42568 568 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-220ENST00000588917 LSSP48449 732 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 RELAQ04206 551 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 IL11RAQ14626 422 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 SETDB1Q15047 1291 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 ZXDCQ2QGD7 858 aaPredicted RBP18.83■□□□□ 0.6
CIRBP-220ENST00000588917 TNFAIP8L3Q5GJ75 292 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 TMEM164Q5U3C3 297 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 KIAA1614Q5VZ46 1190 aa18.83■□□□□ 0.6
CIRBP-220ENST00000588917 SLC22A9Q8IVM8 553 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms