RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 THAP8Q8NA92 274 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 OR2L2Q8NH16 312 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 OR1L3Q8NH93 324 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SLCO2A1Q92959 643 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 GCNAQ96QF7 691 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SEPHS2Q99611 448 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SOSTQ9BQB4 213 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 CCDC3Q9BQI4 270 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 MRPL1Q9BYD6 325 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 KLHL4Q9C0H6 718 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 MYNNQ9NPC7 610 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 GDE1Q9NZC3 331 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 NUDT4Q9NZJ9 180 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 CPSF2Q9P2I0 782 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 CHORDC1Q9UHD1 332 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 ABT1Q9ULW3 272 aaKnown RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 COL16A1Q07092 1604 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 A0A1W2PR80 420 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 NEMP2A6NFY4 417 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 FPGTO14772 594 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 ADAM20O43506 726 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 CDK2AP2O75956 126 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 IGKV3-15P01624 115 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 IGHV2-70P01814 119 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 SLC2A2P11168 524 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 MTHFRP42898 656 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 ZNF75DP51815 510 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 UBXN2AP68543 259 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 C6orf163Q5TEZ5 329 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 SPATA1Q5VX52 437 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 MFSD12Q6NUT3 480 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 G2E3Q7L622 706 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 KRTAP11-1Q8IUC1 163 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 OR6S1Q8NH40 331 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 GTF3AQ92664 365 aaKnown RBP2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 ZNF830Q96NB3 372 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 DGAT2Q96PD7 388 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 CCDC68Q9H2F9 335 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 PRMT7Q9NVM4 692 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 NSMCE4AQ9NXX6 385 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 HAO2Q9NYQ3 351 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 THEGQ9P2T0 379 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 PRO0461Q9UI25 63 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 RPS6KA6Q9UK32 745 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 MAN1B1Q9UKM7 699 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 RARRES3Q9UL19 164 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 RNF150Q9ULK6 438 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 MAGED1Q9Y5V3 778 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 SNX8Q9Y5X2 465 aa2.73□□□□□ -1.97
SMCHD1-206ENST00000581631 ARPC2O15144 300 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 TRUB2O95900 331 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 ABCB1P08183 1280 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 RAB40ALP0C0E4 278 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 LINGO3P0C6S8 592 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 PRKACGP22612 351 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 LMAN1P49257 510 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 LIG4P49917 911 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 GSCP56915 257 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 HUNKP57058 714 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 DLK1P80370 383 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 ELAVL2Q12926 359 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 NFATC2Q13469 925 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 IL11RAQ14626 422 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 MAPRE1Q15691 268 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 MCMDC2Q4G0Z9 681 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 BMP2KLQ5H9B9 411 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 UGT3A1Q6NUS8 523 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 LGI2Q8N0V4 545 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 SYT2Q8N9I0 419 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 ZPLD1Q8TCW7 415 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 MAPK15Q8TD08 544 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 TEKT4Q8WW24 435 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 APOBEC4Q8WW27 367 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 CCDC106Q9BWC9 280 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 CHMP4AQ9BY43 222 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 WWTR1Q9GZV5 400 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 FAM49AQ9H0Q0 323 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 TLE6Q9H808 572 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 TRPV4Q9HBA0 871 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 OLAHQ9NV23 265 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 SLC24A2Q9UI40 661 aa2.72□□□□□ -1.97
SMCHD1-206ENST00000581631 hCG_1809904A0A1W2PP81 198 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A1W2PPE2 198 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A1W2PPM1 405 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A1W2PPQ1 181 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A1W2PR64 198 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 SNURFLB1AK76 121 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 SRRM5B3KS81 715 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 IDH3BO43837 385 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 VTNP04004 478 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 RBMS1P29558 406 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 PTGER4P35408 488 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 NNMTP40261 264 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 CSNK2BP67870 215 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 MS4A2Q01362 244 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 GUCY2DQ02846 1103 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 CALCOCO2Q13137 446 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 VEZF1Q14119 521 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 MTF1Q14872 753 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms