RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 SLC25A41Q8N5S1 370 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 OR5K2Q8NHB8 316 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 C18orf12Q96KH6 178 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 IMMP1LQ96LU5 166 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 SELENOSQ9BQE4 189 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 KCNJ16Q9NPI9 418 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 FKBPLQ9UIM3 349 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 CRLS1Q9UJA2 301 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 ASF1AQ9Y294 204 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 EPN1Q9Y6I3 576 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-211ENST00000579316 SOWAHDA6NJG2 315 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 AP2A1O95782 977 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 HEXAP06865 529 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 DNASE1P24855 282 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 PTPN3P26045 913 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 EEF1DP29692 281 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 GJC1P36383 396 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 TNNT3P45378 269 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 HSF1Q00613 529 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 NAPRTQ6XQN6 538 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 ARHGEF18Q6ZSZ5 1173 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 TAB3Q8N5C8 712 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 HDAC10Q969S8 669 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 LIME1Q9H400 295 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 C14orf105Q9NVL8 296 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 EDARQ9UNE0 448 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 RNF6Q9Y252 685 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 ARL5AQ9Y689 179 aa13.15□□□□□ -0.3
CSNK1D-211ENST00000579316 HYKKA2RU49 373 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 RCCD1A6NED2 376 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 KDM1AO60341 852 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 FBLP22087 321 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 PKLRP30613 574 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 ARHGAP25P42331 645 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TAS2R40P59535 323 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TAF1AQ15573 450 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TUBA3EQ6PEY2 450 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TMEM205Q6UW68 189 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 CAMKMTQ7Z624 323 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 BEST3Q8N1M1 668 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 LINC01555Q8NAE3 123 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 OR4K2Q8NGD2 314 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 SLC35G2Q8TBE7 412 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 OXNAD1Q96HP4 312 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 SIGLEC12Q96PQ1 595 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 C19orf43Q9BQ61 176 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TUBB6Q9BUF5 446 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 FICDQ9BVA6 458 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 HES7Q9BYE0 225 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 UCK2Q9BZX2 261 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 TDRKHQ9Y2W6 561 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
CSNK1D-211ENST00000579316 SCN2AQ99250 2005 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 C2orf81A6NN90 581 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 KLK8O60259 260 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 PROSCO94903 275 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 INHBBP09529 407 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 NFKB1P19838 968 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 ITGALP20701 1170 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 KDELR1P24390 212 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 GRIA3P42263 894 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 OR1C1Q15619 314 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 ACER2Q5QJU3 275 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 WASHC2DQ5SRD0 308 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 TMEM211Q6ICI0 200 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 FIGLAQ6QHK4 219 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 CLEC9AQ6UXN8 241 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 CEP128Q6ZU80 1094 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 SNX20Q7Z614 316 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 KIAA1328Q86T90 577 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 TMEM178AQ8NBL3 297 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 FAM57AQ8TBR7 257 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 RAPGEF5Q92565 580 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 SLC22A18Q96BI1 424 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 RMND5BQ96G75 393 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 ZNF354BQ96LW1 612 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 FCRL5Q96RD9 977 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 MENTQ9BUN1 341 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 POLDIP3Q9BY77 421 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 TGIF2Q9GZN2 237 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 KLHL1Q9NR64 748 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 ZDHHC3Q9NYG2 299 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 PLAGL1Q9UM63 463 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 PLEKHA6Q9Y2H5 1048 aa13.13□□□□□ -0.31
CSNK1D-211ENST00000579316 L3MBTL1Q9Y468 752 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms