RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 AIMP2Q13155 320 aaKnown RBP11.04□□□□□ -0.64
SSH2-208ENST00000579040 INPP5JQ15735 1006 aaPredicted RBP11.04□□□□□ -0.64
SSH2-208ENST00000579040 NKG7Q16617 165 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 LONRF1Q17RB8 773 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 ACSBG2Q5FVE4 666 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.04□□□□□ -0.64
SSH2-208ENST00000579040 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 PRMT9Q6P2P2 845 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 COX15Q7KZN9 410 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 Q8NA96 180 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 ACTRT1Q8TDG2 376 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 KCNJ9Q92806 393 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 FAM136AQ96C01 138 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 MS4A14Q96JA4 679 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 SPSB2Q99619 263 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 ZFYVE21Q9BQ24 234 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 DPH7Q9BTV6 452 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 SLAMF7Q9NQ25 335 aa11.04□□□□□ -0.64
SSH2-208ENST00000579040 UTP6Q9NYH9 597 aaKnown RBP11.04□□□□□ -0.64
SSH2-208ENST00000579040 A0A0J9YVX5 310 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 HYKKA2RU49 373 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 EIF3FO00303 357 aaPredicted RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 CES2O00748 559 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 KIF5CO60282 957 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 VPS26AO75436 327 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 MPC1LP0DKB6 136 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 ERVK-10P10266 1014 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 RPA3P35244 121 aaPredicted RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 RELAQ04206 551 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 SRSF1Q07955 248 aaKnown RBP eCLIP11.03□□□□□ -0.64
SSH2-208ENST00000579040 RAPSNQ13702 412 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 FASTKQ14296 549 aaKnown RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 MUM1Q2TAK8 710 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 FRMPD2BQ6IN97 320 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 REXO1L1PQ8IX06 675 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 PPIL6Q8IXY8 311 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 NAT8LQ8N9F0 302 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 SIGLEC10Q96LC7 697 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 OSBPL9Q96SU4 736 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 PLCD4Q9BRC7 762 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 TRIM56Q9BRZ2 755 aaKnown RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 FAM167BQ9BTA0 163 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 SLC29A3Q9BZD2 475 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 ZNF552Q9H707 407 aaPredicted RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 SLC6A20Q9NP91 592 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 MRPS30Q9NP92 439 aaKnown RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 SEMA3GQ9NS98 782 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 GALPQ9UBC7 116 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 TSR3Q9UJK0 312 aaKnown RBP11.03□□□□□ -0.64
SSH2-208ENST00000579040 CDC23Q9UJX2 597 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 FBXL4Q9UKA2 621 aa11.03□□□□□ -0.64
SSH2-208ENST00000579040 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 LOC102723532A0A0G2JNH3 316 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 GOLGA8MH3BSY2 632 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 SOCS6O14544 535 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 PRPF4O43172 522 aaKnown RBP eCLIP11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 EZRP15311 586 aaKnown RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 SKIV2L2P42285 1042 aaKnown RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 SLC1A2P43004 574 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 CARSP49589 748 aaKnown RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 PNLIPRP1P54315 467 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 FOXL2P58012 376 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ABATP80404 500 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 CTBP1Q13363 440 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 RBBP7Q16576 425 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 KCTD19Q17RG1 926 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 PRTGQ2VWP7 1150 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 PRAMEF13Q5VWM6 474 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ICE2Q659A1 982 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 LRRC8EQ6NSJ5 796 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 SUSD1Q6UWL2 747 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 DENND6AQ8IWF6 608 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 IQCKQ8N0W5 287 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZADH2Q8N4Q0 377 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 GIMAP7Q8NHV1 300 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 GABPB2Q8TAK5 448 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 ASB11Q8WXH4 323 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 INPP5DQ92835 1189 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 MVB12AQ96EY5 273 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 PKP4Q99569 1192 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ACAT2Q9BWD1 397 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZNF304Q9HCX3 659 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 FBXO6Q9NRD1 293 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 C20orf96Q9NUD7 363 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 CTSFQ9UBX1 484 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZNF282Q9UDV7 671 aaPredicted RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 ZC3H7BQ9UGR2 993 aaKnown RBP11.02□□□□□ -0.65
SSH2-208ENST00000579040 FBXO5Q9UKT4 447 aa11.02□□□□□ -0.65
SSH2-208ENST00000579040 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms