RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PAK4O96013 591 aaPredicted RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 APOHP02749 345 aaPredicted RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 CSN3P07498 182 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 HMBSP08397 361 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 PRSS56P0CW18 603 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ERVK-10P10266 1014 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 CASTP20810 708 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 TIMP3P35625 211 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 CRKLP46109 303 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 VAMP7P51809 220 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 MYL7Q01449 175 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 CACNG1Q06432 222 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 SULT2A1Q06520 285 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ZNF273Q14593 569 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 SLMAPQ14BN4 828 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 RBBP7Q16576 425 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 CA9Q16790 459 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 UGT3A2Q3SY77 523 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ZNF876PQ49A33 203 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 KLHL26Q53HC5 615 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 FGD3Q5JSP0 725 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 TCTE1Q5JU00 501 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 DCAF10Q5QP82 559 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 MPP7Q5T2T1 576 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 SHEQ5VZ18 495 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 NOTUMQ6P988 496 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 PPP1R21Q6ZMI0 780 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 SH2D5Q6ZV89 423 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 NUP54Q7Z3B4 507 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 PIWIL3Q7Z3Z3 882 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 ARHGAP22Q7Z5H3 698 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ABI3BPQ7Z7G0 1075 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 TUSC5Q8IXB3 177 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 LGI2Q8N0V4 545 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 FGFBP3Q8TAT2 258 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 MRGPRDQ8TDS7 321 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 FCAMRQ8WWV6 532 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 SEPT1Q8WYJ6 367 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 PROX1Q92786 737 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 EXOC4Q96A65 974 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ALG14Q96F25 216 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 AK8Q96MA6 479 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 INPP5KQ9BT40 448 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 RBM4Q9BWF3 364 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 GTPBP2Q9BX10 602 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 ACTL8Q9H568 366 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 DBNDD1Q9H9R9 158 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 FAM207AQ9NSI2 230 aaPredicted RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 DDX43Q9NXZ2 648 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 POLLQ9UGP5 575 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 LEF1Q9UJU2 399 aaPredicted RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 STUB1Q9UNE7 303 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 KCNK7Q9Y2U2 307 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 IGSF1Q8N6C5 1336 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 STK36Q9NRP7 1315 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 IGHV4-4A0A075B6R2 117 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 A0A0U1RQK1 487 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ZNF320A2RRD8 509 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 A4D1N5 150 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 HHLA1C9JL84 531 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 AP5Z1O43299 807 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 FMO6PO60774 539 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 PGLSO95336 258 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 IGLV1-44P01699 117 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 VTNP04004 478 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 HMOX1P09601 288 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SPP1P10451 314 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 CD22P20273 847 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 NR1D1P20393 614 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 KRT2P35908 639 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 GLIPR1P48060 266 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 POLR2LP62875 67 aaKnown RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 MZT1Q08AG7 82 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 AP1B1Q10567 949 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 TRAP1Q12931 704 aaKnown RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 VEZF1Q14119 521 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SGSM1Q2NKQ1 1148 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 TMEM30BQ3MIR4 351 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 GTDC1Q4AE62 458 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 NHSL2Q5HYW2 709 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 LRRC73Q5JTD7 316 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 SLC10A5Q5PT55 438 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 OTUD3Q5T2D3 398 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 WLSQ5T9L3 541 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ARHGEF16Q5VV41 709 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 LYSMD4Q5XG99 296 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 OR4A47Q6IF82 309 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 FAAP20Q6NZ36 180 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ZNF790Q6PG37 636 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 PSRC1Q6PGN9 363 aaPredicted RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 RAPH1Q70E73 1250 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 ANO5Q75V66 913 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 MARK2Q7KZI7 788 aaKnown RBP2.29□□□□□ -2.04
COPS3-213ENST00000577210 TMPRSS11BQ86T26 416 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 UNC45BQ8IWX7 931 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 KLHL7Q8IXQ5 586 aa2.29□□□□□ -2.04
COPS3-213ENST00000577210 RAB42Q8N4Z0 105 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms