RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 CCDC137Q6PK04 289 aaKnown RBP16.57■□□□□ 0.24
LITAF-211ENST00000572255 DENND6AQ8IWF6 608 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 DTWD1Q8N5C7 304 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 NACC2Q96BF6 587 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 SERPINB12Q96P63 405 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 DPH7Q9BTV6 452 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 ZNF552Q9H707 407 aaPredicted RBP16.57■□□□□ 0.24
LITAF-211ENST00000572255 SLC6A20Q9NP91 592 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 ATP13A2Q9NQ11 1180 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 CTSFQ9UBX1 484 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 CDC23Q9UJX2 597 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 FBXL4Q9UKA2 621 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 NXT1Q9UKK6 140 aaKnown RBP16.57■□□□□ 0.24
LITAF-211ENST00000572255 NEU2Q9Y3R4 380 aa16.57■□□□□ 0.24
LITAF-211ENST00000572255 SPTBN1Q01082 2364 aaKnown RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 DOCK10Q96BY6 2186 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 LOC105369274A0A096LPK9 316 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 LOC102723532A0A0G2JNH3 316 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 ZCWPW2A0A1B0GU75 182 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 OR2A25A4D2G3 310 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 PGRMC1O00264 195 aaKnown RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 MED26O95402 600 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 CATP04040 527 aaKnown RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 EIF2S1P05198 315 aaKnown RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 CTBP1Q13363 440 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 ESPL1Q14674 2120 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 ARHGAP19Q14CB8 494 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 TTLL9Q3SXZ7 439 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 SUSD1Q6UWL2 747 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 SHISA6Q6ZSJ9 500 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 REXO1L1PQ8IX06 675 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 OR4N4Q8N0Y3 316 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 SMPDL3AQ92484 453 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 SLC30A3Q99726 388 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 ZFYVE21Q9BQ24 234 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 SOX17Q9H6I2 414 aaPredicted RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 FBXO6Q9NRD1 293 aaPredicted RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 ZC3H7BQ9UGR2 993 aaKnown RBP16.56■□□□□ 0.24
LITAF-211ENST00000572255 HS3ST3B1Q9Y662 390 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 MAU2Q9Y6X3 613 aa16.56■□□□□ 0.24
LITAF-211ENST00000572255 HEATR5BQ9P2D3 2071 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 SOCS6O14544 535 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 KIF5CO60282 957 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 IPO13O94829 963 aaKnown RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 ERVK-10P10266 1014 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 VARSP26640 1264 aaKnown RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 MAGEA3P43357 314 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 AIMP2Q13155 320 aaKnown RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 TSTA3Q13630 321 aaPredicted RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 PLEKHN1Q494U1 663 aaPredicted RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 FBXO42Q6P3S6 717 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 ZNF549Q6P9A3 640 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 IGFL3Q6UXB1 125 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 NEK10Q6ZWH5 1172 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 SPNS2Q8IVW8 549 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 AGGF1Q8N302 714 aaeCLIP16.55■□□□□ 0.24
LITAF-211ENST00000572255 PKP4Q99569 1192 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 CCDC68Q9H2F9 335 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 ZNF304Q9HCX3 659 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 MRPS30Q9NP92 439 aaKnown RBP16.55■□□□□ 0.24
LITAF-211ENST00000572255 MAP10Q9P2G4 905 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 KLHL42Q9P2K6 505 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 B3GNT3Q9Y2A9 372 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 MED16Q9Y2X0 877 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 MAD1L1Q9Y6D9 718 aa16.55■□□□□ 0.24
LITAF-211ENST00000572255 BLACEA4D250 179 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 VSTM2BA6NLU5 285 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PHF2O75151 1096 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 ALOX12BO75342 701 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 GP1BBP13224 206 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 ITGA3P26006 1051 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 HSD17B2P37059 387 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 SLC1A2P43004 574 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PNLIPRP1P54315 467 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 CUL1Q13616 776 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 RBBP7Q16576 425 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 LONRF1Q17RB8 773 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 FHL5Q5TD97 284 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PRAMEF13Q5VWM6 474 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PRMT9Q6P2P2 845 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PAQR7Q86WK9 346 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 IQCKQ8N0W5 287 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 NAT8LQ8N9F0 302 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 COG1Q8WTW3 980 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 TM9SF4Q92544 642 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 KCNJ9Q92806 393 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 SIGLEC10Q96LC7 697 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 C10orf90Q96M02 699 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PSMG3-AS1Q96PY0 264 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 PLCD4Q9BRC7 762 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 SLC29A3Q9BZD2 475 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 SEMA3GQ9NS98 782 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 C20orf96Q9NUD7 363 aaPredicted RBP16.54■□□□□ 0.24
LITAF-211ENST00000572255 STOX2Q9P2F5 926 aaPredicted RBP16.54■□□□□ 0.24
LITAF-211ENST00000572255 TAC3Q9UHF0 121 aa16.54■□□□□ 0.24
LITAF-211ENST00000572255 MDC1Q14676 2089 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms