RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 MICALCLQ6ZW33 695 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 NEK10Q6ZWH5 1172 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 RNF44Q7L0R7 432 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 FAM20CQ8IXL6 584 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 LMNTD2Q8IXW0 634 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 OR9A1PQ8NGU1 263 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 RERGQ96A58 199 aaPredicted RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 EBNA1BP2Q99848 306 aaKnown RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 MRPS30Q9NP92 439 aaKnown RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 C14orf105Q9NVL8 296 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 ZC3H7BQ9UGR2 993 aaKnown RBP17.79■□□□□ 0.44
LINC01238-205ENST00000567549 HS3ST3B1Q9Y662 390 aa17.79■□□□□ 0.44
LINC01238-205ENST00000567549 A0A0J9YVX5 310 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 A0A0U1RQJ8 604 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 SOCS6O14544 535 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 PRICKLE3O43900 615 aaPredicted RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CNOT3O75175 753 aaKnown RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 MATN4O95460 622 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CBX6O95503 412 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 HPP00738 406 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 EIF2S1P05198 315 aaKnown RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 UQCRHP07919 91 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 ANXA5P08758 320 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 ZSCAN5DPP0CG00 497 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 MGAT1P26572 445 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 FMO4P31512 558 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 TSFMP43897 325 aaKnown RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 BDKRB1P46663 353 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CRADDP78560 199 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CCZ1BP86790 482 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CCZ1P86791 482 aaPredicted RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 GARNL3Q5VVW2 1013 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 ISLR2Q6UXK2 745 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 MAMDC2Q7Z304 686 aaPredicted RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 OR2A1Q8NGT9 310 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 DNAJB14Q8TBM8 379 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CALML6Q8TD86 181 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CABS1Q96KC9 395 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 NAP1L3Q99457 506 aaPredicted RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 DPH7Q9BTV6 452 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 SOX17Q9H6I2 414 aaPredicted RBP17.78■□□□□ 0.44
LINC01238-205ENST00000567549 KLHL42Q9P2K6 505 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 CIDEBQ9UHD4 219 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 PCDHGA10Q9Y5H3 936 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 COMMD10Q9Y6G5 202 aa17.78■□□□□ 0.44
LINC01238-205ENST00000567549 PRRC2CQ9Y520 2896 aaKnown RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 OR2A25A4D2G3 310 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 VSTM2BA6NLU5 285 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 CEP104O60308 925 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 SEMA7AO75326 666 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 CTSBP07858 339 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 ENO3P13929 434 aaPredicted RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 EZRP15311 586 aaKnown RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 ABATP80404 500 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 RELAQ04206 551 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 THOC5Q13769 683 aaKnown RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 ZNF169Q14929 603 aaPredicted RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 NDUFA9Q16795 377 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 KIRREL2Q6UWL6 708 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 IGFL2Q6UWQ7 119 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 KBTBD2Q8IY47 623 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 ST6GALNAC3Q8NDV1 305 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 LPGAT1Q92604 370 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 THOC3Q96J01 351 aaKnown RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 BIRC8Q96P09 236 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 LMF1Q96S06 567 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 XAB2Q9HCS7 855 aaKnown RBP17.77■□□□□ 0.44
LINC01238-205ENST00000567549 LZTFL1Q9NQ48 299 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 SYBUQ9NX95 663 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 CTSFQ9UBX1 484 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 NFS1Q9Y697 457 aa17.77■□□□□ 0.44
LINC01238-205ENST00000567549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.76■□□□□ 0.43
LINC01238-205ENST00000567549 DYTNA2CJ06 578 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CTAGE9A4FU28 777 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CTSVO60911 334 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 PSIP1O75475 530 aaKnown RBP17.76■□□□□ 0.43
LINC01238-205ENST00000567549 ZGLP1P0C6A0 271 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 ERGP11308 486 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 MLNP12872 115 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 ICAM2P13598 275 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 HRH2P25021 359 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 MCM3P25205 808 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 OR1D4P47884 311 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CDC16Q13042 620 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 SIX1Q15475 284 aaPredicted RBP17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CTSL3PQ5NE16 218 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 LRRC8EQ6NSJ5 796 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 NEPROQ6NW34 567 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 FAM180AQ6UWF9 173 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 COX15Q7KZN9 410 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 PRUNE1Q86TP1 453 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 PARP9Q8IXQ6 854 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 OR11G2Q8NGC1 345 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 STT3BQ8TCJ2 826 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 MFSD3Q96ES6 412 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 CNDP1Q96KN2 507 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 PLCD4Q9BRC7 762 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 C3orf18Q9UK00 162 aa17.76■□□□□ 0.43
LINC01238-205ENST00000567549 PYCARDQ9ULZ3 195 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms