RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ATP13A2Q9NQ11 1180 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 SLAMF7Q9NQ25 335 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 MED16Q9Y2X0 877 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 COMMD10Q9Y6G5 202 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 GOLGA6L10A0A0M3HER8 536 aa19■□□□□ 0.63
CLN6-206ENST00000565471 ZNF839A8K0R7 811 aa19■□□□□ 0.63
CLN6-206ENST00000565471 KIF5CO60282 957 aa19■□□□□ 0.63
CLN6-206ENST00000565471 NRP2O60462 931 aa19■□□□□ 0.63
CLN6-206ENST00000565471 IPO13O94829 963 aaKnown RBP19■□□□□ 0.63
CLN6-206ENST00000565471 MPC1LP0DKB6 136 aa19■□□□□ 0.63
CLN6-206ENST00000565471 ENO3P13929 434 aaPredicted RBP19■□□□□ 0.63
CLN6-206ENST00000565471 CTBP1Q13363 440 aa19■□□□□ 0.63
CLN6-206ENST00000565471 INPP5JQ15735 1006 aaPredicted RBP19■□□□□ 0.63
CLN6-206ENST00000565471 LONRF1Q17RB8 773 aa19■□□□□ 0.63
CLN6-206ENST00000565471 PRMT9Q6P2P2 845 aa19■□□□□ 0.63
CLN6-206ENST00000565471 IGFL3Q6UXB1 125 aa19■□□□□ 0.63
CLN6-206ENST00000565471 TMEM151BQ8IW70 566 aa19■□□□□ 0.63
CLN6-206ENST00000565471 REXO1L1PQ8IX06 675 aa19■□□□□ 0.63
CLN6-206ENST00000565471 AGGF1Q8N302 714 aaeCLIP19■□□□□ 0.63
CLN6-206ENST00000565471 SLC35F6Q8N357 371 aa19■□□□□ 0.63
CLN6-206ENST00000565471 GIMAP7Q8NHV1 300 aa19■□□□□ 0.63
CLN6-206ENST00000565471 ZDHHC19Q8WVZ1 309 aaPredicted RBP19■□□□□ 0.63
CLN6-206ENST00000565471 SIGLEC10Q96LC7 697 aa19■□□□□ 0.63
CLN6-206ENST00000565471 PKP4Q99569 1192 aa19■□□□□ 0.63
CLN6-206ENST00000565471 SLC30A3Q99726 388 aa19■□□□□ 0.63
CLN6-206ENST00000565471 MFRPQ9BY79 579 aa19■□□□□ 0.63
CLN6-206ENST00000565471 ZNF552Q9H707 407 aaPredicted RBP19■□□□□ 0.63
CLN6-206ENST00000565471 SLC6A20Q9NP91 592 aa19■□□□□ 0.63
CLN6-206ENST00000565471 MRPS30Q9NP92 439 aaKnown RBP19■□□□□ 0.63
CLN6-206ENST00000565471 FBXO6Q9NRD1 293 aaPredicted RBP19■□□□□ 0.63
CLN6-206ENST00000565471 MAD1L1Q9Y6D9 718 aa19■□□□□ 0.63
CLN6-206ENST00000565471 DOPEY2Q9Y3R5 2298 aa19■□□□□ 0.63
CLN6-206ENST00000565471 FLNCQ14315 2725 aa19■□□□□ 0.63
CLN6-206ENST00000565471 LOC105369274A0A096LPK9 316 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 LOC102723532A0A0G2JNH3 316 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 VSTM2BA6NLU5 285 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 CES2O00748 559 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 RPA3P35244 121 aaPredicted RBP18.99■□□□□ 0.63
CLN6-206ENST00000565471 SLC1A2P43004 574 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 OR1D4P47884 311 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 EMP3P54852 163 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 AIMP2Q13155 320 aaKnown RBP18.99■□□□□ 0.63
CLN6-206ENST00000565471 FBXO42Q6P3S6 717 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 ZNF549Q6P9A3 640 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 SUSD1Q6UWL2 747 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 PPIL6Q8IXY8 311 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 OR4N4Q8N0Y3 316 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 PLCD4Q9BRC7 762 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 SEMA3GQ9NS98 782 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 C20orf96Q9NUD7 363 aaPredicted RBP18.99■□□□□ 0.63
CLN6-206ENST00000565471 CTSFQ9UBX1 484 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 ZC3H7BQ9UGR2 993 aaKnown RBP18.99■□□□□ 0.63
CLN6-206ENST00000565471 CDC23Q9UJX2 597 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 FBXL4Q9UKA2 621 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 DHRS7Q9Y394 339 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 HS3ST3B1Q9Y662 390 aa18.99■□□□□ 0.63
CLN6-206ENST00000565471 SOCS6O14544 535 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 ZSCAN12O43309 604 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 VPS26AO75436 327 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 CCNDBP1O95273 360 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 MED26O95402 600 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 SLC16A8O95907 504 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 UQCRFS1P47985 274 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 PNLIPRP1P54315 467 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 YBX1P67809 324 aaKnown RBP18.98■□□□□ 0.63
CLN6-206ENST00000565471 RELAQ04206 551 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 PRDX1Q06830 199 aaKnown RBP18.98■□□□□ 0.63
CLN6-206ENST00000565471 MUM1Q2TAK8 710 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 PRTGQ2VWP7 1150 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 RNASEH2BQ5TBB1 312 aaKnown RBP18.98■□□□□ 0.63
CLN6-206ENST00000565471 ICE2Q659A1 982 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 ASB11Q8WXH4 323 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 TM9SF4Q92544 642 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 INPP5DQ92835 1189 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 VPS50Q96JG6 964 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 FAM167BQ9BTA0 163 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 ZNF304Q9HCX3 659 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 UTP6Q9NYH9 597 aaKnown RBP18.98■□□□□ 0.63
CLN6-206ENST00000565471 LUZP4Q9P127 313 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 TAC3Q9UHF0 121 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 FBXO5Q9UKT4 447 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 SNX12Q9UMY4 172 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 SHANK1Q9Y566 2161 aa18.98■□□□□ 0.63
CLN6-206ENST00000565471 E7ENX8 843 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 GFYI3L273 518 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 EIF3FO00303 357 aaPredicted RBP18.97■□□□□ 0.63
CLN6-206ENST00000565471 EIF2S1P05198 315 aaKnown RBP18.97■□□□□ 0.63
CLN6-206ENST00000565471 F7P08709 466 aaPredicted RBP18.97■□□□□ 0.63
CLN6-206ENST00000565471 ERVK-10P10266 1014 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 GNLYP22749 145 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 TAP2Q03519 686 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 CUL1Q13616 776 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 PRAMEF13Q5VWM6 474 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 ZNF425Q6IV72 752 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 KIRREL2Q6UWL6 708 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 PAQR7Q86WK9 346 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 DTWD1Q8N5C7 304 aa18.97■□□□□ 0.63
CLN6-206ENST00000565471 METTL27Q8N6F8 245 aaPredicted RBP18.97■□□□□ 0.63
CLN6-206ENST00000565471 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms