RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 EMC4Q5J8M3 183 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ACER2Q5QJU3 275 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 WASHC2DQ5SRD0 308 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 SLC9A4Q6AI14 798 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TMEM211Q6ICI0 200 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 FRMPD2BQ6IN97 320 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PRMT9Q6P2P2 845 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 FIGLAQ6QHK4 219 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 NPNTQ6UXI9 565 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 APTXQ7Z2E3 356 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 CD163Q86VB7 1156 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF227Q86WZ6 799 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 CDC20BQ86Y33 519 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 CRLF3Q8IUI8 442 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TMTC1Q8IUR5 882 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 SLC25A41Q8N5S1 370 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 AMER3Q8N944 861 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 LMNTD1Q8N9Z9 388 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TTC29Q8NA56 475 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TMEM178AQ8NBL3 297 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 LRRN4CLQ8ND94 238 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 OR4K2Q8NGD2 314 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 RND1Q92730 232 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TRIM11Q96F44 468 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 RMND5BQ96G75 393 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 OXNAD1Q96HP4 312 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 SEC16BQ96JE7 1060 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TEKT5Q96M29 485 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TUBB6Q9BUF5 446 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TGIF2Q9GZN2 237 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 HAUS4Q9H6D7 363 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ANKRD10Q9NXR5 420 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 SCN3AQ9NY46 2000 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 STOX2Q9P2F5 926 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 FAM153AQ9UHL3 310 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 POLG2Q9UHN1 485 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 GNPTGQ9UJJ9 305 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ANAPC7Q9UJX3 599 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ASF1AQ9Y294 204 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TDRKHQ9Y2W6 561 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ARL5AQ9Y689 179 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 HIVEP2P31629 2446 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 LOC105369274A0A096LPK9 316 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 TRBV5-4A0A0C4DH59 114 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 LOC102723532A0A0G2JNH3 316 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 A0A1B0GTH9 108 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 SLC5A10A0PJK1 596 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 SRPX2O60687 465 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 AP2A1O95782 977 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 RAF1P04049 648 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 UQCRHP07919 91 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ICAM2P13598 275 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CD46P15529 392 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF24P17028 368 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 NFKB1P19838 968 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 FBLP22087 321 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CXCR2P25025 360 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 PTGS2P35354 604 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CDKN1CP49918 316 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 NR0B1P51843 470 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 DGKQP52824 942 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 NUP107P57740 925 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 VSX2P58304 361 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 AP2B1P63010 937 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 WASHC5Q12768 1159 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 FASTKQ14296 549 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 GRB7Q14451 532 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 HADHQ16836 314 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 PRTGQ2VWP7 1150 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 PLAG1Q6DJT9 500 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CHSY3Q70JA7 882 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ZZZ3Q8IYH5 903 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CLYBLQ8N0X4 340 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 OR4N4Q8N0Y3 316 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 CIARTQ8N365 385 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ARHGEF39Q8N4T4 335 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 KCTD6Q8NC69 237 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ENOX1Q8TC92 643 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 HEXDCQ8WVB3 486 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 RAPGEF5Q92565 580 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 DCUN1D1Q96GG9 259 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 COX4I2Q96KJ9 171 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF354BQ96LW1 612 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 COPS8Q99627 209 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 OLFM1Q99784 485 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 SELENOSQ9BQE4 189 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 FICDQ9BVA6 458 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 FAM96AQ9H5X1 160 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 SYNPO2LQ9H987 977 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 C14orf105Q9NVL8 296 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 ZDHHC3Q9NYG2 299 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 LIMA1Q9UHB6 759 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 TEKT2Q9UIF3 430 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 MYO6Q9UM54 1294 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 HEY1Q9Y5J3 304 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 KLK4Q9Y5K2 254 aa7.3□□□□□ -1.24
HERPUD1-206ENST00000563343 IGHV3-20A0A0C4DH32 117 aa7.29□□□□□ -1.24
HERPUD1-206ENST00000563343 C3orf70A6NLC5 250 aaPredicted RBP7.29□□□□□ -1.24
HERPUD1-206ENST00000563343 LRRC53A6NM62 1247 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms