RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC26A11Q86WA9 606 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 TTC29Q8NA56 475 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 FBXO15Q8NCQ5 510 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 FBXO25Q8TCJ0 367 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF480Q8WV37 535 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 DPH2Q9BQC3 489 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 NLNQ9BYT8 704 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 TRIM54Q9BYV2 358 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 SEMA4CQ9C0C4 833 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 ADAMTS6Q9UKP5 1117 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 MAN2B2Q9Y2E5 1009 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 PADI2Q9Y2J8 665 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 PSAT1Q9Y617 370 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 PCM1Q15154 2024 aa12.45□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM95CA0A1B0GW59 222 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ESYT3A0FGR9 886 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTSVO60911 334 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 PIAS1O75925 651 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 FURINP09958 794 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ERGP11308 486 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 IMPA1P29218 277 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ARSFP54793 590 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 YBX1P67809 324 aaKnown RBP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 TIAL1Q01085 375 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 NFATC3Q12968 1075 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 SP140Q13342 867 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 GRM7Q14831 915 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 CRTC2Q53ET0 693 aaPredicted RBP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 TCTE1Q5JU00 501 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ICE2Q659A1 982 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 C3orf62Q6ZUJ4 267 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF572Q7Z3I7 529 aaPredicted RBP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZC3HC1Q86WB0 502 aaKnown RBP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 PROKR1Q8TCW9 393 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 VPS39Q96JC1 886 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 CCDC138Q96M89 665 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 OLFM1Q99784 485 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZFYVE21Q9BQ24 234 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 C17orf62Q9BQA9 187 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 LRRC1Q9BTT6 524 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 PARVBQ9HBI1 364 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 SLC6A20Q9NP91 592 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 CCDC177Q9NQR7 707 aaPredicted RBP12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 MOCS1Q9NZB8 636 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 TCFL5Q9UL49 500 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 PDE10AQ9Y233 779 aa12.44□□□□□ -0.42
CTDSPL2-209ENST00000560620 E7ENX8 843 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 NRP2O60462 931 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 RAB40ALP0C0E4 278 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 FDXRP22570 491 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 TAP2Q03519 686 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 PRDX1Q06830 199 aaKnown RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 KCNAB2Q13303 367 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 NCF4Q15080 339 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 TRADDQ15628 312 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM214AQ32MH5 1076 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 NKAIN1Q4KMZ8 207 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM69BQ5VUD6 431 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 FRMPD2BQ6IN97 320 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF517Q6ZMY9 492 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 MBOAT1Q6ZNC8 495 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF843Q8N446 348 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 MNS1Q8NEH6 495 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 RERGQ96A58 199 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 ATG10Q9H0Y0 220 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 CUTCQ9NTM9 273 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 ARL15Q9NXU5 204 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 STOX2Q9P2F5 926 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 HEMK1Q9Y5R4 338 aaPredicted RBP12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 KCNMB2Q9Y691 235 aa12.43□□□□□ -0.42
CTDSPL2-209ENST00000560620 A0A1B0GX78 115 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 TCRBV9S1A1TA0A576 114 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 OR2A25A4D2G3 310 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 H3BMH7 237 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 SLC16A5O15375 505 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 C1QL1O75973 258 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 GUCA1CO95843 209 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 TUBB4AP04350 444 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 CD63P08962 238 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 PIM1P11309 404 aaPredicted RBP12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 FOLR3P41439 243 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 MAGEA4P43358 317 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 TBPL1P62380 186 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 ABATP80404 500 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 NFKB2Q00653 900 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 IL10RAQ13651 578 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 ZNF460Q14592 562 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 PHKG1Q16816 387 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 UGT8Q16880 541 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 PRAMEF13Q5VWM6 474 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 AGTRAPQ6RW13 159 aa12.42□□□□□ -0.42
CTDSPL2-209ENST00000560620 FAM198BQ6UWH4 519 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms