RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ZNF771Q7L3S4 317 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 LCA5Q86VQ0 697 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 OR2L3Q8NG85 312 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 OR2A1Q8NGT9 310 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 MZB1Q8WU39 189 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 KIAA1191Q96A73 305 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 IL17FQ96PD4 163 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 MIPEPQ99797 713 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 SELENOSQ9BQE4 189 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FAM117AQ9C073 453 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 NMRAL1Q9HBL8 299 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ENAMQ9NRM1 1142 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FGF21Q9NSA1 209 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 STOX2Q9P2F5 926 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 TSR3Q9UJK0 312 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 SERTAD3Q9UJW9 196 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 A0A1W2PPV9 198 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 PRAMEF10O60809 474 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FAM155BO75949 473 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 LTA4HP09960 611 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 SLC35E2BP0CK96 405 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 LIPCP11150 499 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 COL6A2P12110 1019 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CD1DP15813 335 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 TYK2P29597 1187 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ETV5P41161 510 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 PRDX1Q06830 199 aaKnown RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 MPP2Q14168 576 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 MROH9Q5TGP6 573 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CAPN13Q6MZZ7 669 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 KLC3Q6P597 504 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 LRRC56Q8IYG6 542 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 RHEBL1Q8TAI7 183 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ANKRD49Q8WVL7 239 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 DLG3Q92796 817 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 N4BP2L2Q92802 583 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 FBXL8Q96CD0 374 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 HAUS8Q9BT25 410 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 EPN3Q9H201 632 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 CAB39LQ9H9S4 337 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ADAMTS6Q9UKP5 1117 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 TMEM184BQ9Y519 407 aaPredicted RBP13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 PCDHB3Q9Y5E6 796 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 B3GALT1Q9Y5Z6 326 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 AP1M2Q9Y6Q5 423 aa13.47□□□□□ -0.25
PKNOX1-209ENST00000560448 ADAMTS20P59510 1910 aa13.46□□□□□ -0.25
PKNOX1-209ENST00000560448 A0A087WV48 116 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 IQANK1A0A1B0GTG1 560 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 TMEM120BA0PK00 339 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SYCE1LA8MT33 242 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 PHGDHO43175 533 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SRPX2O60687 465 aaPredicted RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 IPO13O94829 963 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 HBQ1P09105 142 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 EIF2S3P41091 472 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 MAGEA12P43365 314 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 ZNF460Q14592 562 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 ACAP2Q15057 778 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 PHKG1Q16816 387 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 TSNAXIP1Q2TAA8 658 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 ICE2Q659A1 982 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 AGTRAPQ6RW13 159 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 LCTLQ6UWM7 567 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 LRRC69Q6ZNQ3 347 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SRRM1Q8IYB3 904 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 GPR135Q8IZ08 494 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 OR56A3Q8NH54 315 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 ZNF501Q96CX3 271 aaPredicted RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 LRFN5Q96NI6 719 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SGPP1Q9BX95 441 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 CCDC134Q9H6E4 229 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 MRPS30Q9NP92 439 aaKnown RBP13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SNX15Q9NRS6 342 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 SENP1Q9P0U3 644 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 PLCL2Q9UPR0 1127 aa13.46□□□□□ -0.26
PKNOX1-209ENST00000560448 A0A096LPK6 155 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 A0A1W2PPM1 405 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 HMX2A2RU54 273 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 KLHL2O95198 593 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 C2P06681 752 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 EBLN1P0CF75 366 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 FOLR1P15328 257 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 MAGP20916 626 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 GRIA3P42263 894 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 SLC18A1P54219 525 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 UCNP55089 124 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 TBPL1P62380 186 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 SH3BP2P78314 561 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 FASTKQ14296 549 aaKnown RBP13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 CSHL1Q14406 222 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 TGFBIQ15582 683 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 THEMIS2Q5TEJ8 643 aa13.45□□□□□ -0.26
PKNOX1-209ENST00000560448 YOD1Q5VVQ6 348 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms