RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 NEIL2Q969S2 332 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 UBE2E3Q969T4 207 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 ROPN1LQ96C74 230 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 MTFMTQ96DP5 389 aaKnown RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 METTL2AQ96IZ6 378 aaKnown RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 CAMK1GQ96NX5 476 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 ZBTB18Q99592 522 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 GPR174Q9BXC1 333 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 FOXQ1Q9C009 403 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 DENND2DQ9H6A0 471 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 BRF2Q9HAW0 419 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 WASH6PQ9NQA3 447 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 IMP3Q9NV31 184 aaKnown RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 BAIAP2L1Q9UHR4 511 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 WDR37Q9Y2I8 494 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PLEKHM1Q9Y4G2 1056 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 POLR3HQ9Y535 204 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 A0A1W2PP18 115 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 A8MUI8 341 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 H0Y8X5 98 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 LMNAP02545 664 aaKnown RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 G6PDP11413 515 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 PRPS2P11908 318 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 CD22P20273 847 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 JAK1P23458 1154 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 NDUFS1P28331 727 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 NEK2P51955 445 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 POLR2JP52435 117 aaKnown RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 SRP54P61011 504 aaKnown RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 UFM1P61960 85 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 NXPE4Q6UWF7 544 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 SUSD1Q6UWL2 747 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 ABRAXAS1Q6UWZ7 409 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 FBXW8Q8N3Y1 598 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 GLB1L3Q8NCI6 653 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 BIRC7Q96CA5 298 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 SPDL1Q96EA4 605 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 PDXPQ96GD0 296 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 IL17FQ96PD4 163 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 CHRDQ9H2X0 955 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 TBC1D17Q9HA65 648 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 EBF2Q9HAK2 575 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 PELI2Q9HAT8 420 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 GID8Q9NWU2 228 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 C2orf42Q9NWW7 574 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 TRNAU1APQ9NX07 287 aaKnown RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 SLC7A8Q9UHI5 535 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 CROTQ9UKG9 612 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 PLAGL1Q9UM63 463 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 CFAP20Q9Y6A4 193 aaKnown RBP12.06□□□□□ -0.48
SHMT2-233ENST00000557529 DGKBQ9Y6T7 804 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 COLEC10Q9Y6Z7 277 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 DOCK9Q9BZ29 2069 aa12.06□□□□□ -0.48
SHMT2-233ENST00000557529 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 A0A1W2PPC4 97 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CCDC154A6NI56 674 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TNFP01375 233 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 MTHFD1P11586 935 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CAPN3P20807 821 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 VARSP26640 1264 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RAB28P51157 221 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 MTTPP55157 894 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PSME3P61289 254 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PHEXP78562 749 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 SLBPQ14493 270 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CLCA4Q14CN2 919 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 KIAA0040Q15053 153 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RPE65Q16518 533 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 ALG11Q2TAA5 492 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 VPS26BQ4G0F5 336 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TPRG1LQ5T0D9 272 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 C1orf146Q5VVC0 180 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 DUS1LQ6P1R4 473 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PRMT9Q6P2P2 845 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 RD3Q7Z3Z2 195 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 C17orf64Q86WR6 236 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 LAS2Q8IYD9 372 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 KRT78Q8N1N4 520 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CAMKK1Q8N5S9 505 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 OR7G3Q8NG95 312 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PROKR1Q8TCW9 393 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CLDN23Q96B33 292 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 CLPTM1LQ96KA5 538 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PRDM8Q9NQV8 689 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 SPATA6Q9NWH7 488 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 GEMIN8Q9NWZ8 242 aaKnown RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 VPS29Q9UBQ0 182 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 LEF1Q9UJU2 399 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PCOLCE2Q9UKZ9 415 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 TSC22D4Q9Y3Q8 395 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 SZT2Q5T011 3432 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 PIPSLA2A3N6 862 aa12.05□□□□□ -0.48
SHMT2-233ENST00000557529 FOXE1O00358 373 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-233ENST00000557529 ANKRD28O15084 1053 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms