RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 OR1I1O60431 355 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 EPHX1P07099 455 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 DGKQP52824 942 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 UFM1P61960 85 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 RBM20Q5T481 1227 aaKnown RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PLPP4Q5VZY2 271 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 LINC00471Q8N535 108 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 ITM2CQ9NQX7 267 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 MAU2Q9Y6X3 613 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PLOD2O00469 737 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 KCNA5P22460 613 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 CAP1Q01518 475 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 ABHD18Q0P651 414 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 CBLBQ13191 982 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 NIPAL1Q6NVV3 410 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 FBXL22Q6P050 247 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 GPR135Q8IZ08 494 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 TTLQ8NG68 377 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 KIAA1191Q96A73 305 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 STOX2Q9P2F5 926 aaPredicted RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 FKBP7Q9Y680 259 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 HTRA2O43464 458 aaPredicted RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 RFPL1O75677 317 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 INMTO95050 263 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 MATN4O95460 622 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PEPDP12955 493 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 FUT4P22083 530 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 FAM124AQ86V42 546 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 NUDT13Q86X67 352 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 CEP76Q8TAP6 659 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 RDH12Q96NR8 316 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 MND1Q9BWT6 205 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 SMOC2Q9H3U7 446 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 TCF7L1Q9HCS4 588 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 STYXL1Q9Y6J8 313 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 FAM208AQ9UK61 1670 aaKnown RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 DUXAA6NLW8 204 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PEX10O60683 326 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 CSTF1Q05048 431 aaKnown RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 WSCD2Q2TBF2 565 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 OR4F3Q6IEY1 312 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PSRC1Q6PGN9 363 aaPredicted RBP13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PIM3Q86V86 326 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 OR9I1Q8NGQ6 314 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 TSPEARQ8WU66 669 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 LCN9Q8WX39 176 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 ZSWIM3Q96MP5 696 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 PTPN18Q99952 460 aa13.62□□□□□ -0.23
VTI1B-204ENST00000554659 LCHNA4D1U4 455 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 AKAP8O43823 692 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 RNASEH2AO75792 299 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 SLC15A1P46059 708 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 ACADVLP49748 655 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 EMX2Q04743 252 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 COX18Q8N8Q8 333 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 C2CD4AQ8NCU7 369 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 RPF2Q9H7B2 306 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 MKS1Q9NXB0 559 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 MKLN1Q9UL63 735 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 CREG1O75629 220 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 CD72P21854 359 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 CSKP41240 450 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 USF2Q15853 346 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 CARD16Q5EG05 197 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 GOLGA7Q7Z5G4 137 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 OR4F6Q8NGB9 312 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 POPDC3Q9HBV1 291 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 TBCCD1Q9NVR7 557 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 P2RX2Q9UBL9 471 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PCDHGB1Q9Y5G3 927 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PIK3C2AO00443 1686 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 TCHHQ07283 1943 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 BHMG1C9JSJ3 638 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 I3L521 148 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 MANBAO00462 879 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 KMOO15229 486 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 GATBO75879 557 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 F7P08709 466 aaPredicted RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 DDX6P26196 483 aaKnown RBP eCLIP13.61□□□□□ -0.235e-9■□□□□ 8.9
VTI1B-204ENST00000554659 GRK5P34947 590 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 GRK6P43250 576 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 RPL19P84098 196 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 EIF2S3LQ2VIR3 472 aaKnown RBP13.61□□□□□ -0.23
VTI1B-204ENST00000554659 SMYD5Q6GMV2 418 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 SYCE2Q6PIF2 218 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 ADGRG6Q86SQ4 1221 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 CILP2Q8IUL8 1156 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 COL21A1Q96P44 957 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 ZSCAN5AQ9BUG6 496 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 WDR37Q9Y2I8 494 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
VTI1B-204ENST00000554659 PSMD9O00233 223 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms