RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 RTN4RL2Q86UN3 420 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 NUDT13Q86X67 352 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 METTL23Q86XA0 190 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 EID3Q8N140 333 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 ZBTB8BQ8NAP8 495 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-211ENST00000554437 OR11H4Q8NGC9 324 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-211ENST00000554437 TAF4BQ92750 862 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 SIPA1Q96FS4 1042 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 THOC1Q96FV9 657 aaKnown RBP4.54□□□□□ -1.68
SCFD1-211ENST00000554437 LINC00615Q96LM1 132 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-211ENST00000554437 RAD9AQ99638 391 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 THUMPD3Q9BV44 507 aaKnown RBP4.54□□□□□ -1.68
SCFD1-211ENST00000554437 FGF21Q9NSA1 209 aa4.54□□□□□ -1.68
SCFD1-211ENST00000554437 IGHV2-70P01814 119 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 UBASH3AP57075 661 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 MAT1AQ00266 395 aaKnown RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 IL1RL1Q01638 556 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF415Q09FC8 603 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 PTPRCAPQ14761 206 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 PPA1Q15181 289 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 CA9Q16790 459 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ODF4Q2M2E3 257 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 VWC2Q2TAL6 325 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 SPDYCQ5MJ68 293 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 KRT39Q6A163 491 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 KRT80Q6KB66 452 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ZBTB49Q6ZSB9 765 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 NUP54Q7Z3B4 507 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 PIWIL3Q7Z3Z3 882 aaKnown RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 PIGZQ86VD9 579 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 TDRD5Q8NAT2 981 aaKnown RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 SLC4A11Q8NBS3 891 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 DDHD1Q8NEL9 900 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 CTCFLQ8NI51 663 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 GRK7Q8WTQ7 553 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 HPSE2Q8WWQ2 592 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 EXOC4Q96A65 974 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 RMDN1Q96DB5 314 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ARSGQ96EG1 525 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 CABS1Q96KC9 395 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 TSGA13Q96PP4 275 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 RAB3IPQ96QF0 476 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ZNF71Q9NQZ8 489 aaPredicted RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 C2orf42Q9NWW7 574 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 CPSF3Q9UKF6 684 aaKnown RBP4.53□□□□□ -1.68
SCFD1-211ENST00000554437 RNF150Q9ULK6 438 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 ATP6V0A2Q9Y487 856 aa4.53□□□□□ -1.68
SCFD1-211ENST00000554437 A0A0U1RQK1 487 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 A0A1W2PPQ1 181 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 ZNF320A2RRD8 509 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 DIAPH2O60879 1101 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 GAS8-AS1O95177 125 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 CCDC175P0C221 793 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 CDH3P22223 829 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 PEX19P40855 299 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 TRIM29Q14134 588 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 TAF7Q15545 349 aaPredicted RBP4.52□□□□□ -1.69
SCFD1-211ENST00000554437 UGP2Q16851 508 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 C2orf76Q3KRA6 126 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 PRR27Q6MZM9 219 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 DET1Q7L5Y6 550 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 CHST3Q7LGC8 479 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 C10orf53Q8N6V4 93 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 WDSUB1Q8N9V3 476 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 ADAD2Q8NCV1 583 aaKnown RBP4.52□□□□□ -1.69
SCFD1-211ENST00000554437 OR6J1Q8NGC5 347 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 SUSD6Q92537 303 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 KRT35Q92764 455 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 PTP4A1Q93096 173 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 FAM162AQ96A26 154 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 ANP32EQ9BTT0 268 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 PFDN4Q9NQP4 134 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 DCAF16Q9NXF7 216 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 MRPS28Q9Y2Q9 187 aaKnown RBP4.52□□□□□ -1.69
SCFD1-211ENST00000554437 RRP15Q9Y3B9 282 aaKnown RBP4.52□□□□□ -1.69
SCFD1-211ENST00000554437 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
SCFD1-211ENST00000554437 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 ENO4A6NNW6 628 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 H0YAE9 185 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 WDR46O15213 610 aaKnown RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 KERAO60938 352 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 CDC123O75794 336 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 SLCO2B1O94956 709 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 CELF2O95319 508 aaKnown RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 GUCA1CO95843 209 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 IGLV1-44P01699 117 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 HAPLN1P10915 354 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 TCF7P36402 384 aaPredicted RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 MAGEA11P43364 429 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 RPL21P46778 160 aaKnown RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 RAB28P51157 221 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 MAZP56270 477 aaKnown RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 POLR2FP61218 127 aaKnown RBP4.51□□□□□ -1.69
SCFD1-211ENST00000554437 HERV-K104P61576 105 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 PMP22Q01453 160 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 SP3Q02447 781 aa4.51□□□□□ -1.69
SCFD1-211ENST00000554437 ITGA9Q13797 1035 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms