RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PTCHD3Q3KNS1 767 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 PLA2G4EQ3MJ16 856 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 GTDC1Q4AE62 458 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 ZNF658BQ4V348 819 aaPredicted RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 FAM98BQ52LJ0 330 aaKnown RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 LIPJQ5W064 366 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 ANKRD54Q6NXT1 300 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 TBPL2Q6SJ96 375 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 SERPINA13PQ6UXR4 307 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 KRTCAP2Q8N6L1 136 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 TRIML2Q8N7C3 387 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 PJA1Q8NG27 643 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 WDR20Q8TBZ3 569 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 SELENOMQ8WWX9 145 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 ATOH1Q92858 354 aaPredicted RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 GLMNQ92990 594 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 TBC1D20Q96BZ9 403 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 NMD3Q96D46 503 aaKnown RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 FBXL20Q96IG2 436 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 METTL2AQ96IZ6 378 aaKnown RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 LRIG1Q96JA1 1093 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 MPP4Q96JB8 637 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 HIST1H2AHQ96KK5 128 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 RNF145Q96MT1 663 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 HIST1H2AJQ99878 128 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 P2RY13Q9BPV8 354 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 H2AFJQ9BTM1 129 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 BBS2Q9BXC9 721 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 FAM83DQ9H4H8 585 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 KAT8Q9H7Z6 458 aaKnown RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 ZFP14Q9HCL3 533 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 TDP1Q9NUW8 608 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 DNAJB9Q9UBS3 223 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.98□□□□□ -0.97
DDB1-211ENST00000538280 PPT2Q9UMR5 302 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 GMEB1Q9Y692 573 aa8.98□□□□□ -0.97
DDB1-211ENST00000538280 COL4A3Q01955 1670 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 KIAA1549LQ6ZVL6 1849 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SLC5A10A0PJK1 596 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PRR23AA6NEV1 266 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 C16orf96A6NNT2 1141 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 FADS2P1A8MWK0 482 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 C2CD4DB7Z1M9 353 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 H3BSA7 217 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PSMD11O00231 422 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 CXCR6O00574 342 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ALPLP05186 524 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ASGR2P07307 311 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 CTSLP07711 333 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SRPRAP08240 638 aaKnown RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 CISD3P0C7P0 127 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 HSD3B1P14060 373 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 NELFEP18615 380 aaKnown RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 TACR1P25103 407 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 NFKBIAP25963 317 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 HSD3B2P26439 372 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SLC5A2P31639 672 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ARSFP54793 590 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 HSPA14Q0VDF9 509 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 MYBPC3Q14896 1274 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PON2Q15165 354 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 CPSF6Q16630 551 aaKnown RBP eCLIP8.97□□□□□ -0.97
DDB1-211ENST00000538280 DPY19L1Q2PZI1 675 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.97□□□□□ -0.97
DDB1-211ENST00000538280 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ARHGAP15Q53QZ3 475 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 LY6G5CQ5SRR4 150 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 LDLRAP1Q5SW96 308 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 TTC33Q6PID6 262 aaPredicted RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 ABRAXAS1Q6UWZ7 409 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 CHPFQ8IZ52 775 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PGBD3Q8N328 593 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SVOPLQ8N434 492 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 CPA6Q8N4T0 437 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 FAM86B1Q8N7N1 296 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 MRPL43Q8N983 215 aaKnown RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 FBXO15Q8NCQ5 510 aaPredicted RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 TTC16Q8NEE8 873 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 OR10A6Q8NH74 314 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 MCOLN3Q8TDD5 553 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 WFIKKN2Q8TEU8 576 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 BTN2A2Q8WVV5 523 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 TMBIM1Q969X1 311 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 C11orf24Q96F05 449 aaPredicted RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 APIPQ96GX9 242 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ITCHQ96J02 903 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 OR52E6Q96RD3 313 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SEPHS2Q99611 448 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 ZSCAN5AQ9BUG6 496 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 LINC00597Q9H2U6 94 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PIF1Q9H611 641 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 RMND5AQ9H871 391 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 PCDH12Q9NPG4 1184 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 SLC6A13Q9NSD5 602 aa8.97□□□□□ -0.97
DDB1-211ENST00000538280 DCAF13Q9NV06 445 aaKnown RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 SPATA6Q9NWH7 488 aaPredicted RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 RSL24D1Q9UHA3 163 aaKnown RBP8.97□□□□□ -0.97
DDB1-211ENST00000538280 ZNHIT2Q9UHR6 403 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms