RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	ADRM1	Q16186	407 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	CCDC6	Q16204	474 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	UAP1	Q16222	522 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	LONRF1	Q17RB8	773 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	KRT71	Q3SY84	523 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GPR33	Q49SQ1	333 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	AASDH	Q4L235	1098 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ANKRD20A4	Q4UJ75	823 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ATP13A5	Q4VNC0	1218 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	LACTB2	Q53H82	288 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	FASTKD1	Q53R41	847 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	C19orf54	Q5BKX5	351 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SPANXN3	Q5MJ09	141 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	LDLRAP1	Q5SW96	308 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	FNBP1L	Q5T0N5	605 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GPRC6A	Q5T6X5	926 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	LYPLAL1	Q5VWZ2	237 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	MRNIP	Q6NTE8	343 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	DOK6	Q6PKX4	331 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM111B	Q6SJ93	734 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	C6orf89	Q6UWU4	347 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	CERS6	Q6ZMG9	384 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	MACC1	Q6ZN28	852 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GCNT7	Q6ZNI0	430 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	RFLNA	Q6ZTI6	216 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TAS2R42	Q7RTR8	314 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	RD3	Q7Z3Z2	195 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SNX20	Q7Z614	316 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ABI3BP	Q7Z7G0	1075 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ADGRE4P	Q86SQ3	457 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TRIM74	Q86UV6	250 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	PARG	Q86W56	976 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	PALM2	Q8IXS6	379 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZBED8	Q8IZ13	594 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ABCA7	Q8IZY2	2146 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	MPP5	Q8N3R9	675 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SUMF1	Q8NBK3	374 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GPR156	Q8NFN8	814 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	OR5M3	Q8NGP4	307 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	OR4L1	Q8NH43	312 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266		Q8TCH9	128 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	FBXO25	Q8TCJ0	367 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNF398	Q8TD17	642 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	DTX3L	Q8TDB6	740 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	PYROXD1	Q8WU10	500 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SNX33	Q8WV41	574 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	HEXDC	Q8WVB3	486 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ART4	Q93070	314 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GLYATL1	Q969I3	302 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	HDAC10	Q969S8	669 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	EID2B	Q96D98	161 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TBATA	Q96M53	351 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	VPS35	Q96QK1	796 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SMAD5	Q99717	465 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	EBNA1BP2	Q99848	306 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	FAM167B	Q9BTA0	163 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	APOO	Q9BUR5	198 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	KIFC1	Q9BW19	673 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	GTPBP2	Q9BX10	602 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TEX101	Q9BY14	249 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ASPSCR1	Q9BZE9	553 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	NSRP1	Q9H0G5	558 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	STMN4	Q9H169	189 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ABCG8	Q9H221	673 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ASB8	Q9H765	288 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	VPS37B	Q9H9H4	285 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	EBF2	Q9HAK2	575 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	MSL2	Q9HCI7	577 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SAYSD1	Q9NPB0	183 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	MBNL1	Q9NR56	388 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	CHRAC1	Q9NRG0	131 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	KLC4	Q9NSK0	619 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TREX1	Q9NSU2	369 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	C20orf96	Q9NUD7	363 aa	Predicted RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TMEM74B	Q9NUR3	256 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SMOX	Q9NWM0	555 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TXNDC16	Q9P2K2	825 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ST6GALNAC2	Q9UJ37	374 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	CNOT11	Q9UKZ1	510 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ANKRD6	Q9Y2G4	727 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SLCO1B1	Q9Y6L6	691 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SCN8A	Q9UQD0	1980 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	CUL9	Q8IWT3	2517 aa		4.23	□□□□□ -1.73
SNHG1-208	ENST00000538266	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	LNP1	A1A4G5	178 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	CFAP73	A6NFT4	308 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	NEMP2	A6NFY4	417 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	OR51F1	A6NGY5	319 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PATE3	B3GLJ2	98 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	C10orf142	B7Z368	130 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	GPR89A	B7ZAQ6	455 aa		4.22	□□□□□ -1.73
SNHG1-208	ENST00000538266	PROB1	E7EW31	1015 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms