RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 FTH1P02794 183 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 VTNP04004 478 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HLA-DQB2P05538 268 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FYNP06241 537 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CDK1P06493 297 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 PGK2P07205 417 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ABCB1P08183 1280 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MTHFD1P11586 935 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 BMP4P12644 408 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HSD3B1P14060 373 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SLC2A4P14672 509 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 EPB42P16452 691 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CTPS1P17812 591 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ALOX12P18054 663 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 TYMPP19971 482 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 RPS3P23396 243 aaKnown RBP eCLIP5.67□□□□□ -1.54e-7■■■■■ 40.4
CHD4-206ENST00000536999 LMO2P25791 158 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HSD3B2P26439 372 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HLA-DMAP28067 261 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HOXA11P31270 313 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 CD86P42081 329 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MLLT3P42568 568 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 CASP3P42574 277 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MAGEA11P43364 429 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CCR10P46092 362 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HTR3AP46098 478 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CAPZA2P47755 286 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 DIO3P55073 304 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CDKN2DP55273 166 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 C21orf58P58505 322 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ERVK-21P61565 698 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 NPRL3Q12980 569 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 KCNC3Q14003 757 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 PON2Q15165 354 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 TIGD6Q17RP2 521 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 RSPO4Q2I0M5 234 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 TMEM44Q2T9K0 475 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 PGS1Q32NB8 556 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ADPRMQ3LIE5 342 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 DUSP28Q4G0W2 176 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 RAB6CQ53S08 254 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 RABL3Q5HYI8 236 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CEP78Q5JTW2 689 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 PAGE3Q5JUK9 113 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SIRPB2Q5JXA9 342 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FAM72AQ5TYM5 149 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 OTUD1Q5VV17 481 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 FAM72DQ6L9T8 149 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FAM171BQ6P995 826 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CYHR1Q6ZMK1 362 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ZNF517Q6ZMY9 492 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 ARHGAP36Q6ZRI8 547 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CREB3L2Q70SY1 520 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 IKBIPQ70UQ0 350 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 EIF3MQ7L2H7 374 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 SYVN1Q86TM6 617 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 TAC4Q86UU9 113 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 C11orf74Q86VG3 221 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FAM72BQ86X60 149 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CALHM3Q86XJ0 350 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ARHGAP12Q8IWW6 846 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 UBQLNLQ8IYU4 475 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ABI1Q8IZP0 508 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CPA6Q8N4T0 437 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ACVR1CQ8NER5 493 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 OR10A6Q8NH74 314 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SPATA22Q8NHS9 363 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SUN5Q8TC36 379 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ANKRD49Q8WVL7 239 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 GTF2H4Q92759 462 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 AP2M1Q96CW1 435 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CDKN2AIPNLQ96HQ2 116 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 SENP8Q96LD8 212 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 MBOAT4Q96T53 435 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CSF3RQ99062 836 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 HERC2P3Q9BVR0 1158 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 CDCA4Q9BXL8 241 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 TEX12Q9BXU0 123 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 PRRG3Q9BZD7 231 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 REXO4Q9GZR2 422 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 C6orf62Q9GZU0 229 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 NAA50Q9GZZ1 169 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 SIK2Q9H0K1 926 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 RAB6CQ9H0N0 254 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 NSUN3Q9H649 340 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 CLMPQ9H6B4 373 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 ARMC7Q9H6L4 198 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 NOL6Q9H6R4 1146 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 LRTM1Q9HBL6 345 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 FBRSL1Q9HCM7 1045 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 SEMA4BQ9NPR2 832 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 RPRD1BQ9NQG5 326 aaKnown RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 CLN6Q9NWW5 311 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 IMPAD1Q9NX62 359 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 UBP1Q9NZI7 540 aa5.67□□□□□ -1.5
CHD4-206ENST00000536999 UXTQ9UBK9 157 aaPredicted RBP5.67□□□□□ -1.5
CHD4-206ENST00000536999 OPTCQ9UBM4 332 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms