RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 FDXRP22570 491 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 PNLIPRP1P54315 467 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 FRG1Q14331 258 aaKnown RBP10.2□□□□□ -0.78
CD44-227ENST00000528086 HIF1AQ16665 826 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 PRTGQ2VWP7 1150 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 NKAIN1Q4KMZ8 207 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 UBAP2Q5T6F2 1119 aaKnown RBP10.2□□□□□ -0.78
CD44-227ENST00000528086 TLDC1Q6P9B6 456 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 ZDHHC24Q6UX98 284 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 ZNF572Q7Z3I7 529 aaPredicted RBP10.2□□□□□ -0.78
CD44-227ENST00000528086 PCGF5Q86SE9 256 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 ZNF605Q86T29 641 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 CALML6Q8TD86 181 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 ZUFSPQ96AP4 578 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 SNF8Q96H20 258 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 PLCD4Q9BRC7 762 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 FAM167BQ9BTA0 163 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 DPH7Q9BTV6 452 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 RAB11FIP5Q9BXF6 653 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 FANCEQ9HB96 536 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 ZC3H7BQ9UGR2 993 aaKnown RBP10.2□□□□□ -0.78
CD44-227ENST00000528086 TP53TG5Q9Y2B4 290 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
CD44-227ENST00000528086 SCN2AQ99250 2005 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 A0A0J9YVX5 310 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 CTAGE15A4D2H0 777 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 H0YGG7 62 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 P2RX6O15547 441 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 CEACAM4O75871 244 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ENO3P13929 434 aaPredicted RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 GMPRP36959 345 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 OR1D4P47884 311 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 VSX2P58304 361 aaPredicted RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 GPX6P59796 221 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ARF3P61204 181 aaPredicted RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 RPS15P62841 145 aaKnown RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 PRDX1Q06830 199 aaKnown RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 PDIA2Q13087 525 aaKnown RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 ATP1A4Q13733 1029 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ZNF460Q14592 562 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ARHGAP19Q14CB8 494 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 WASHC2DQ5SRD0 308 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 HECTD2Q5U5R9 776 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ICE2Q659A1 982 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 KIAA0408Q6ZU52 694 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 PPP1R32Q7Z5V6 425 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 CTAGE6Q86UF2 777 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ZC3HC1Q86WB0 502 aaKnown RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 PLD3Q8IV08 490 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 PDIK1LQ8N165 341 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 METTL27Q8N6F8 245 aaPredicted RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 FBXO36Q8NEA4 188 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 SMPDL3AQ92484 453 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 SLC22A18Q96BI1 424 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 OR2A5Q96R48 311 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 SPSB2Q99619 263 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 ERP44Q9BS26 406 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 NAT9Q9BTE0 207 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 TRIM4Q9C037 500 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 DPH5Q9H2P9 285 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 RNF14Q9UBS8 474 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 TAC3Q9UHF0 121 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 MAN2B2Q9Y2E5 1009 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 MRPS2Q9Y399 296 aaKnown RBP10.19□□□□□ -0.78
CD44-227ENST00000528086 COMMD10Q9Y6G5 202 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 AP1M2Q9Y6Q5 423 aa10.19□□□□□ -0.78
CD44-227ENST00000528086 CNTRLQ7Z7A1 2325 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 PRRC2CQ9Y520 2896 aaKnown RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 ARGFXA6NJG6 315 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 VSTM2BA6NLU5 285 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 EIF3FO00303 357 aaPredicted RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 HAT1O14929 419 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 FOXS1O43638 330 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 SLC28A2O43868 658 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 FKBP9O95302 570 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 STATHP02808 62 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 CATP04040 527 aaKnown RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 SSTR1P30872 391 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 TAS2R39P59534 338 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 DCDP81605 110 aaKnown RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 HKDC1Q2TB90 917 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 MLIPQ5VWP3 458 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 SBSNQ6UWP8 590 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 TTLL10Q6ZVT0 673 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 UBE2R2Q712K3 238 aaPredicted RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 VN1R4Q7Z5H5 301 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 CEP97Q8IW35 865 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 GPR135Q8IZ08 494 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 C9orf43Q8TAL5 461 aaPredicted RBP10.18□□□□□ -0.78
CD44-227ENST00000528086 GSDMBQ8TAX9 411 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 PROKR1Q8TCW9 393 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 ANKRD49Q8WVL7 239 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 LRRC39Q96DD0 335 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 LINGO1Q96FE5 620 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 FOPNLQ96NB1 174 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 RUNDC3BQ96NL0 473 aa10.18□□□□□ -0.78
CD44-227ENST00000528086 OR4K3Q96R72 315 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms