RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 ANKRD12Q6UB98 2062 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 HYKKA2RU49 373 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 OR2A25A4D2G3 310 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 A6NL46 340 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 ARHGEF33A8MVX0 844 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 EIF3FO00303 357 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 CTSVO60911 334 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 CNOT3O75175 753 aaKnown RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 VPS4BO75351 444 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 SORBS2O94875 1100 aaKnown RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 UMODP07911 640 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 MPC1LP0DKB6 136 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 ITGAXP20702 1163 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 PRDX1Q06830 199 aaKnown RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 AIMP2Q13155 320 aaKnown RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 MYBPC3Q14896 1274 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 NADK2Q4G0N4 442 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 RNF44Q7L0R7 432 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 PPP1R32Q7Z5V6 425 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 GALNT16Q8N428 558 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 FAM26EQ8N5C1 309 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 CPT1CQ8TCG5 803 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 ASB11Q8WXH4 323 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 INPP5DQ92835 1189 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 PNPLA2Q96AD5 504 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 MIPEPQ99797 713 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 ZFYVE21Q9BQ24 234 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 GALPQ9UBC7 116 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 VPS4AQ9UN37 437 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 RUVBL2Q9Y230 463 aaKnown RBP12.82□□□□□ -0.36
CAPN1-207ENST00000527189 DHRS7Q9Y394 339 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 MAP4K5Q9Y4K4 846 aa12.82□□□□□ -0.36
CAPN1-207ENST00000527189 VSTM2BA6NLU5 285 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 GOLGA8MH3BSY2 632 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 GFYI3L273 518 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 ZBTB14O43829 449 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 KIF5CO60282 957 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 VPS26AO75436 327 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 CCNDBP1O95273 360 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 GP1BBP13224 206 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 PSMB5P28074 263 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 RPA3P35244 121 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 VSX2P58304 361 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 ABATP80404 500 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 CTBP1Q13363 440 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 FASTKQ14296 549 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SLC9A5Q14940 896 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 NKG7Q16617 165 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 MUM1Q2TAK8 710 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 LRRC8EQ6NSJ5 796 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 UGT3A1Q6NUS8 523 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 DENND6AQ8IWF6 608 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SLC35F6Q8N357 371 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 COG1Q8WTW3 980 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 TM9SF4Q92544 642 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SLCO2A1Q92959 643 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 MVB12AQ96EY5 273 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 PKP4Q99569 1192 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SPSB2Q99619 263 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 PLCD4Q9BRC7 762 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 TRIM56Q9BRZ2 755 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 FAM167BQ9BTA0 163 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 NAT9Q9BTE0 207 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 DPH7Q9BTV6 452 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF304Q9HCX3 659 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 MRPS30Q9NP92 439 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SLAMF7Q9NQ25 335 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SEMA3GQ9NS98 782 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 C20orf96Q9NUD7 363 aaPredicted RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 ZC3H7BQ9UGR2 993 aaKnown RBP12.81□□□□□ -0.36
CAPN1-207ENST00000527189 FBXO5Q9UKT4 447 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 SNX12Q9UMY4 172 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 CDC14AQ9UNH5 594 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 MED16Q9Y2X0 877 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 MAD1L1Q9Y6D9 718 aa12.81□□□□□ -0.36
CAPN1-207ENST00000527189 TNRC6AQ8NDV7 1962 aaKnown RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 ICE1Q9Y2F5 2266 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 PCM1Q15154 2024 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 A0A0J9YVX5 310 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 TXNDC9O14530 226 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 TTC4O95801 387 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 TCP1P17987 556 aaKnown RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 MCM3P25205 808 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 SKIV2L2P42285 1042 aaKnown RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 CARSP49589 748 aaKnown RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 PTK6Q13882 451 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 PPP1R7Q15435 360 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 KCTD19Q17RG1 926 aaPredicted RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 RNASEH2BQ5TBB1 312 aaKnown RBP12.8□□□□□ -0.36
CAPN1-207ENST00000527189 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 FRMPD2BQ6IN97 320 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 ZNF549Q6P9A3 640 aa12.8□□□□□ -0.36
CAPN1-207ENST00000527189 CYHR1Q6ZMK1 362 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms