RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 C1orf185Q5T7R7 199 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 LINGO4Q6UY18 593 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 FAM83HQ6ZRV2 1179 aaPredicted RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 C11orf57Q6ZUT1 292 aaPredicted RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 BIVMQ86UB2 503 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 HOOK3Q86VS8 718 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 MICU3Q86XE3 530 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 CNTN4Q8IWV2 1026 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 ULK2Q8IYT8 1036 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 CMTM4Q8IZR5 234 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SFRP1Q8N474 314 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 ZNF366Q8N895 744 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 POMGNT2Q8NAT1 580 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 POGLUT1Q8NBL1 392 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 OR7D4Q8NG98 312 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 OR2T3Q8NH03 318 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 CCDC110Q8TBZ0 833 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SPPL2BQ8TCT7 592 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 ACMSDQ8TDX5 336 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 GANCQ8TET4 914 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SCFD1Q8WVM8 642 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 NRGNQ92686 78 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SMARCE1Q969G3 411 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 MTFMTQ96DP5 389 aaKnown RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SPACA9Q96E40 222 aaPredicted RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 DTNBP1Q96EV8 351 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SLC35A4Q96G79 324 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 TTC25Q96NG3 672 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 STRA6Q9BX79 667 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 TEKT3Q9BXF9 490 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 RNF26Q9BY78 433 aaPredicted RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 FAM129AQ9BZQ8 928 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 NELFAQ9H3P2 528 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 MANSC1Q9H8J5 431 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SGK2Q9HBY8 427 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 NECTIN3Q9NQS3 549 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 IARS2Q9NSE4 1012 aaKnown RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 ING3Q9NXR8 418 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 IFNKQ9P0W0 207 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 TRPS1Q9UHF7 1281 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 TLK1Q9UKI8 766 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 NAALAD2Q9Y3Q0 740 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 LOXL2Q9Y4K0 774 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SRPRBQ9Y5M8 271 aaKnown RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 KLF2Q9Y5W3 355 aaPredicted RBP5.02□□□□□ -1.61
PABPC1-223ENST00000523636 SNX9Q9Y5X1 595 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 HS3ST4Q9Y661 456 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 CLCA3PQ9Y6N3 262 aa5.02□□□□□ -1.61
PABPC1-223ENST00000523636 LOC101059948A0A1B0GTJ6 334 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ANKUB1A6NFN9 424 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 FAM47DPA6NHR8 397 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ACOD1A6NK06 481 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 CLCA1A8K7I4 914 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 NEDD8-MDP1E9PL57 170 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 DNAJB5O75953 348 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ALPPP05187 535 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ANXA2P07355 339 aaKnown RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ANXA6P08133 673 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ALPPL2P10696 532 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TYRP14679 529 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 COX6B1P14854 86 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ZNF3P17036 446 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 BMP7P18075 431 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 LRPAP1P30533 357 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 SSTR2P30874 369 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 PRKAR1BP31321 381 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 UGT1A3P35503 534 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TAGLN2P37802 199 aaKnown RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 CASP3P42574 277 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 PITPNBP48739 271 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 GNAQP50148 359 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 YWHAZP63104 245 aaKnown RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 NKX6-1P78426 367 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 DUSP2Q05923 314 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 SPAG1Q07617 926 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 EIF3IQ13347 325 aaKnown RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ART3Q13508 389 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TRA2AQ13595 282 aaKnown RBP eCLIP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 PTK6Q13882 451 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TUBB2AQ13885 445 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TFDP1Q14186 410 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 GALNT3Q14435 633 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ZBTB6Q15916 424 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 DPYSL2Q16555 572 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 MEP1BQ16820 701 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 CFAP221Q4G0U5 840 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 PLEKHS1Q5SXH7 462 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 SHEQ5VZ18 495 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 RRAGBQ5VZM2 374 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 FAM111BQ6SJ93 734 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 LCNL1Q6ZST4 164 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 Q6ZVL8 140 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 RRAGAQ7L523 313 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 ANKS1BQ7Z6G8 1248 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 TMEM135Q86UB9 458 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 WDR49Q8IV35 697 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 CCDC117Q8IWD4 279 aaPredicted RBP5.01□□□□□ -1.61
PABPC1-223ENST00000523636 IQUBQ8NA54 791 aa5.01□□□□□ -1.61
PABPC1-223ENST00000523636 SYT8Q8NBV8 401 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms