RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 GP1BBP13224 206 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 CMPK1P30085 196 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 YBX1P67809 324 aaKnown RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 AIMP2Q13155 320 aaKnown RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 RNF44Q7L0R7 432 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 OR4N4Q8N0Y3 316 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 MCUQ8NE86 351 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 ZNF669Q96BR6 464 aaPredicted RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 MS4A14Q96JA4 679 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 DPH7Q9BTV6 452 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 XAB2Q9HCS7 855 aaKnown RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 CTSFQ9UBX1 484 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 FBXL4Q9UKA2 621 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 NXT1Q9UKK6 140 aaKnown RBP19.91■□□□□ 0.78
CLDND1-216ENST00000507944 B3GNT3Q9Y2A9 372 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 JRKLQ9Y4A0 524 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 MAU2Q9Y6X3 613 aa19.91■□□□□ 0.78
CLDND1-216ENST00000507944 OR2A25A4D2G3 310 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 CTAGE9A4FU28 777 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 TCP11X1B4DZS4 312 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 GOLGA8MH3BSY2 632 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SOCS6O14544 535 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 PSIP1O75475 530 aaKnown RBP19.9■□□□□ 0.78
CLDND1-216ENST00000507944 USP1O94782 785 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 EIF2S1P05198 315 aaKnown RBP19.9■□□□□ 0.78
CLDND1-216ENST00000507944 ERGP11308 486 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 ITGA3P26006 1051 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 COILP38432 576 aaPredicted RBP19.9■□□□□ 0.78
CLDND1-216ENST00000507944 THOC5Q13769 683 aaKnown RBP19.9■□□□□ 0.78
CLDND1-216ENST00000507944 NAA25Q14CX7 972 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 ZNF470Q6ECI4 717 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 FBXO42Q6P3S6 717 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SUSD1Q6UWL2 747 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SHISA6Q6ZSJ9 500 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 IQCKQ8N0W5 287 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 ZADH2Q8N4Q0 377 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 DTWD1Q8N5C7 304 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SMPDL3AQ92484 453 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 TM9SF4Q92544 642 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SOX17Q9H6I2 414 aaPredicted RBP19.9■□□□□ 0.78
CLDND1-216ENST00000507944 LRRC4CQ9HCJ2 640 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 ZNF304Q9HCX3 659 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 SLC6A20Q9NP91 592 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 FAM114A2Q9NRY5 505 aa19.9■□□□□ 0.78
CLDND1-216ENST00000507944 MYO1CO00159 1063 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 AGFG2O95081 481 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 MED26O95402 600 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 CATP04040 527 aaKnown RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 RPA3P35244 121 aaPredicted RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 CLCN7P51798 805 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 CTBP1Q13363 440 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 TSTA3Q13630 321 aaPredicted RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 ARHGAP19Q14CB8 494 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 PRAMEF13Q5VWM6 474 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 CCDC137Q6PK04 289 aaKnown RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 KIRREL2Q6UWL6 708 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 DENND6AQ8IWF6 608 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 SNRNP40Q96DI7 357 aaKnown RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 C19orf60Q96EN9 201 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 SERPINB12Q96P63 405 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 PKP4Q99569 1192 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 SLC30A3Q99726 388 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 ZFYVE21Q9BQ24 234 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 SLC29A3Q9BZD2 475 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 ZBTB20Q9HC78 741 aaPredicted RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 MRPS30Q9NP92 439 aaKnown RBP19.89■□□□□ 0.77
CLDND1-216ENST00000507944 SEMA3GQ9NS98 782 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 HS3ST3B1Q9Y662 390 aa19.89■□□□□ 0.77
CLDND1-216ENST00000507944 ZCWPW2A0A1B0GU75 182 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 VSTM2BA6NLU5 285 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 F7P08709 466 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-216ENST00000507944 HSD17B2P37059 387 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 RBBP7Q16576 425 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 CYP1B1Q16678 543 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 MUM1Q2TAK8 710 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 TTLL9Q3SXZ7 439 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 PRMT9Q6P2P2 845 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 NEK10Q6ZWH5 1172 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 REXO1L1PQ8IX06 675 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 CISD2Q8N5K1 135 aaKnown RBP19.88■□□□□ 0.77
CLDND1-216ENST00000507944 NAP1L3Q99457 506 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-216ENST00000507944 PLCD4Q9BRC7 762 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 CCDC68Q9H2F9 335 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 FBXO6Q9NRD1 293 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-216ENST00000507944 STOX2Q9P2F5 926 aaPredicted RBP19.88■□□□□ 0.77
CLDND1-216ENST00000507944 KLHL42Q9P2K6 505 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 NEU2Q9Y3R4 380 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 SVILO95425 2214 aa19.88■□□□□ 0.77
CLDND1-216ENST00000507944 ZNF839A8K0R7 811 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 H0YGG7 62 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 ALOX12BO75342 701 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 ERVK-10P10266 1014 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 PNLIPRP1P54315 467 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 ARF3P61204 181 aaPredicted RBP19.87■□□□□ 0.77
CLDND1-216ENST00000507944 OCA2Q04671 838 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 MRPL49Q13405 166 aaKnown RBP19.87■□□□□ 0.77
CLDND1-216ENST00000507944 EIF2S3LQ2VIR3 472 aaKnown RBP19.87■□□□□ 0.77
CLDND1-216ENST00000507944 PRTGQ2VWP7 1150 aa19.87■□□□□ 0.77
CLDND1-216ENST00000507944 ZNF549Q6P9A3 640 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms