RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZNF398Q8TD17 642 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 TMEM125Q96AQ2 219 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 IMP4Q96G21 291 aaKnown RBP11.84□□□□□ -0.51
LSM6-204ENST00000504181 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
LSM6-204ENST00000504181 OLFM1Q99784 485 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 OR6C2Q9NZP2 312 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 A0A0G2JNJ9 132 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 NME2P1O60361 137 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 SLC25A12O75746 678 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 SUN1O94901 812 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 IFNA2P01563 188 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 NME2P22392 152 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 TACR1P25103 407 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 KIR2DS3Q14952 304 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 TAZQ16635 292 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 CMPK2Q5EBM0 449 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 ZC3H12BQ5HYM0 836 aaKnown RBP11.83□□□□□ -0.52
LSM6-204ENST00000504181 TMEM205Q6UW68 189 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 ELOA2Q8IYF1 753 aaPredicted RBP11.83□□□□□ -0.52
LSM6-204ENST00000504181 LMNTD1Q8N9Z9 388 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 FAM222BQ8WU58 562 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 DCUN1D1Q96GG9 259 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 C14orf105Q9NVL8 296 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.83□□□□□ -0.52
LSM6-204ENST00000504181 Q9UFV3 132 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 ZC3H7BQ9UGR2 993 aaKnown RBP11.83□□□□□ -0.52
LSM6-204ENST00000504181 ASF1AQ9Y294 204 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 KIAA1549Q9HCM3 1950 aa11.83□□□□□ -0.52
LSM6-204ENST00000504181 NR0B1P51843 470 aaKnown RBP11.82□□□□□ -0.52
LSM6-204ENST00000504181 ZNF658BQ4V348 819 aaPredicted RBP11.82□□□□□ -0.52
LSM6-204ENST00000504181 CCDC183Q5T5S1 534 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 FRMPD2BQ6IN97 320 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 FIGLAQ6QHK4 219 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 GLT6D1Q7Z4J2 308 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 ULK2Q8IYT8 1036 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 C2orf73Q8N5S3 287 aaPredicted RBP11.82□□□□□ -0.52
LSM6-204ENST00000504181 OR5M9Q8NGP3 310 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 BLOC1S5Q8TDH9 187 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 MENTQ9BUN1 341 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 SARGQ9BW04 601 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 TRABDQ9H4I3 376 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 ASB8Q9H765 288 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 PNPLA3Q9NST1 481 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 UBP1Q9NZI7 540 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 PKP3Q9Y446 797 aa11.82□□□□□ -0.52
LSM6-204ENST00000504181 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 EIF2S1P05198 315 aaKnown RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 C8orf89P0DMQ9 161 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 RALBP11234 206 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 PEX19P40855 299 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 IFI35P80217 286 aaPredicted RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 GBE1Q04446 702 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 SLC10A2Q12908 348 aaPredicted RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 DAZAP2Q15038 168 aaPredicted RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 SLC25A35Q3KQZ1 300 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 ZNF468Q5VIY5 522 aaPredicted RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 PLAG1Q6DJT9 500 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 ARHGAP11AQ6P4F7 1023 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 CAPN12Q6ZSI9 719 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 LANCL3Q6ZV70 420 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 YTHDF3Q7Z739 585 aaKnown RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 TADA1Q96BN2 335 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 C10orf90Q96M02 699 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 SECISBP2Q96T21 854 aaKnown RBP11.81□□□□□ -0.52
LSM6-204ENST00000504181 TTYH2Q9BSA4 534 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 ATG10Q9H0Y0 220 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 SLC25A51Q9H1U9 297 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 ATP6V1DQ9Y5K8 247 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 NCKAP5O14513 1909 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 FREM3P0C091 2139 aa11.81□□□□□ -0.52
LSM6-204ENST00000504181 NPIPA2E9PIF3 369 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 NPIPA3F8WFD2 350 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 SMPD2O60906 423 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 CTSVO60911 334 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 GLI4P10075 376 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 BMP7P18075 431 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 MX2P20592 715 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 ACVR2AP27037 513 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 ADH7P40394 386 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 PRKCIP41743 596 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 CHRNA4P43681 627 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 POU4F3Q15319 338 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 SYT16Q17RD7 645 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 MUM1Q2TAK8 710 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 GXYLT1Q4G148 440 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 FILIP1LQ4L180 1135 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 SIRPB2Q5JXA9 342 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 ZNF585AQ6P3V2 769 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 TBC1D21Q8IYX1 336 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 LRRC75A-AS1Q8N1F1 130 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 SLC25A41Q8N5S1 370 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 POGLUT1Q8NBL1 392 aa11.8□□□□□ -0.52
LSM6-204ENST00000504181 OR52N2Q8NGI0 321 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms