RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 TAP2Q03519 686 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 CALCOCO2Q13137 446 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 FRG1Q14331 258 aaKnown RBP23.65■■□□□ 1.38
UPF3A-209ENST00000492270 DUPD1Q68J44 220 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 ZNF605Q86T29 641 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 LRRC56Q8IYG6 542 aaPredicted RBP23.65■■□□□ 1.38
UPF3A-209ENST00000492270 PROKR1Q8TCW9 393 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 ADAMTS17Q8TE56 1095 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 LINGO1Q96FE5 620 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 ZNF285Q96NJ3 590 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 SELENOSQ9BQE4 189 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 MRPS30Q9NP92 439 aaKnown RBP23.65■■□□□ 1.38
UPF3A-209ENST00000492270 ZFATQ9P243 1243 aa23.65■■□□□ 1.38
UPF3A-209ENST00000492270 LOC105369274A0A096LPK9 316 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 IGKV1-8A0A0C4DH67 115 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 LOC102723532A0A0G2JNH3 316 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 OR2A25A4D2G3 310 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 C9J4A7 227 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 CNOT3O75175 753 aaKnown RBP23.64■■□□□ 1.37
UPF3A-209ENST00000492270 ITGAXP20702 1163 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 FDXRP22570 491 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 RGS4P49798 205 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 FOXL2P58012 376 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 VSX2P58304 361 aaPredicted RBP23.64■■□□□ 1.37
UPF3A-209ENST00000492270 MGAT5Q09328 741 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 MLIPQ5VWP3 458 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 ICE2Q659A1 982 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 CPZQ66K79 652 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 MBOAT1Q6ZNC8 495 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 TTLL10Q6ZVT0 673 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 RNF44Q7L0R7 432 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 ZNF572Q7Z3I7 529 aaPredicted RBP23.64■■□□□ 1.37
UPF3A-209ENST00000492270 TMEM151BQ8IW70 566 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 OR4N4Q8N0Y3 316 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 DTWD1Q8N5C7 304 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 SEC14L1Q92503 715 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 SYNPO2LQ9H987 977 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 TUBD1Q9UJT1 453 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 PDE10AQ9Y233 779 aa23.64■■□□□ 1.37
UPF3A-209ENST00000492270 NDC80O14777 642 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 PIAS1O75925 651 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 DNAJB5O75953 348 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 TSPAN12O95859 305 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 PLA2G2AP14555 144 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 ALAS2P22557 587 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 HSD17B2P37059 387 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 DCDP81605 110 aaKnown RBP23.63■■□□□ 1.37
UPF3A-209ENST00000492270 CHAF1BQ13112 559 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 CBLBQ13191 982 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 PDAP1Q13442 181 aaKnown RBP23.63■■□□□ 1.37
UPF3A-209ENST00000492270 TRADDQ15628 312 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 LRRC8EQ6NSJ5 796 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 FAM45BPQ6NSW5 357 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 MYO1HQ8N1T3 1032 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 C9orf43Q8TAL5 461 aaPredicted RBP23.63■■□□□ 1.37
UPF3A-209ENST00000492270 FAM45AQ8TCE6 357 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 ABHD17AQ96GS6 310 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 TRIM55Q9BYV6 548 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 FAM117AQ9C073 453 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 SAYSD1Q9NPB0 183 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 ZNF71Q9NQZ8 489 aaPredicted RBP23.63■■□□□ 1.37
UPF3A-209ENST00000492270 SMYD2Q9NRG4 433 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 SLC22A11Q9NSA0 550 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 CUTCQ9NTM9 273 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 MOCS1Q9NZB8 636 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 NDOR1Q9UHB4 597 aa23.63■■□□□ 1.37
UPF3A-209ENST00000492270 CORO1CQ9ULV4 474 aaPredicted RBP23.63■■□□□ 1.37
UPF3A-209ENST00000492270 ZNF839A8K0R7 811 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 KLF7O75840 302 aaPredicted RBP23.62■■□□□ 1.37
UPF3A-209ENST00000492270 PMS2P54278 862 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 PHKG1Q16816 387 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 NKAIN1Q4KMZ8 207 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 TCTE1Q5JU00 501 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 WASHC2DQ5SRD0 308 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 STRA8Q7Z7C7 330 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 PAQR7Q86WK9 346 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 PLCD4Q9BRC7 762 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 CUEDC1Q9NWM3 386 aaPredicted RBP23.62■■□□□ 1.37
UPF3A-209ENST00000492270 STOX2Q9P2F5 926 aaPredicted RBP23.62■■□□□ 1.37
UPF3A-209ENST00000492270 IFT80Q9P2H3 777 aaPredicted RBP23.62■■□□□ 1.37
UPF3A-209ENST00000492270 VWA7Q9Y334 891 aa23.62■■□□□ 1.37
UPF3A-209ENST00000492270 A0A1B0GX78 115 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 ARGFXA6NJG6 315 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 MED26O95402 600 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 C8GP07360 202 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 NR1D1P20393 614 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 SSTR1P30872 391 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 PRDX1Q06830 199 aaKnown RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 FBXO42Q6P3S6 717 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 ZC3HC1Q86WB0 502 aaKnown RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 PTRH1Q86Y79 214 aaKnown RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 METTL27Q8N6F8 245 aaPredicted RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 TTC29Q8NA56 475 aaPredicted RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 PYROXD1Q8WU10 500 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 THAP4Q8WY91 577 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 ZFYVE21Q9BQ24 234 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 GPN3Q9UHW5 284 aaPredicted RBP23.61■■□□□ 1.37
UPF3A-209ENST00000492270 SPTA1P02549 2419 aa23.61■■□□□ 1.37
UPF3A-209ENST00000492270 HELZ2Q9BYK8 2649 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms