RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ARFGAP1Q8N6T3 406 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 CADM4Q8NFZ8 388 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 RPLP0P6Q8NHW5 317 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ANP32BQ92688 251 aaKnown RBP5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 IGSF8Q969P0 613 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 P2RY11Q96G91 374 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ABCB8Q9NUT2 735 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 TMEM248Q9NWD8 314 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 RCOR3Q9P2K3 495 aaPredicted RBP5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 PEMTQ9UBM1 199 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 SUN2Q9UH99 717 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 EIF2B4Q9UI10 523 aaKnown RBP5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ANAPC7Q9UJX3 599 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 MKLN1Q9UL63 735 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 CLEC4EQ9ULY5 219 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 SLC8A2Q9UPR5 921 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ADAM18Q9Y3Q7 739 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 COPG1Q9Y678 874 aaKnown RBP5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 PI4KAP42356 2102 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ABCA7Q8IZY2 2146 aa5.5□□□□□ -1.53
NHLRC3-205ENST00000485407 ITPR3Q14573 2671 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 PLXND1Q9Y4D7 1925 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 A0A1W2PQM1 296 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TARSL2A2RTX5 802 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 PMS2P1A4D2B8 440 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ZSCAN5CA6NGD5 496 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ZNF487B1APH4 448 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 RTCAO00442 366 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TRIM24O15164 1050 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LDLRAD4O15165 306 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 IPO13O94829 963 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 KLF8O95600 359 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 APBB3O95704 486 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 KRT7P08729 469 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 C1SP09871 688 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SELLP14151 372 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 OR1E1P30953 314 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TLX1P31314 330 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CD70P32970 193 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 BUD31P41223 144 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CSKP41240 450 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SGSHP51688 502 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CLCN2P51788 898 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LIMK1P53667 647 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ST8SIA6P61647 398 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 HSD11B2P80365 405 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ECT2LQ008S8 904 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CSTF1Q05048 431 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ZBTB16Q05516 673 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 KDSRQ06136 332 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 MESP2Q0VG99 397 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 AP1B1Q10567 949 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LMAN2Q12907 356 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TUBB3Q13509 450 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ALKBH1Q13686 389 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ZNF234Q14588 700 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 PDK2Q15119 407 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 FSCBQ5H9T9 825 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LRRC38Q5VT99 294 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TMEM215Q68D42 235 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 KRT80Q6KB66 452 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 C11orf88Q6PI97 169 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SLC30A9Q6PML9 568 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 C19orf48Q6RUI8 117 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 Q6ZS52 159 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SLC46A3Q7Z3Q1 461 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SDCCAG8Q86SQ7 713 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 NLRP14Q86W24 1093 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LONP2Q86WA8 852 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 LRRC49Q8IUZ0 686 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 MAP7D3Q8IWC1 876 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 UMODL1-AS1Q8N2C9 162 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ALLCQ8N6M5 410 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CCDC185Q8N715 623 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 RTL3Q8N8U3 475 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 DCAF4L2Q8NA75 395 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 OR52N2Q8NGI0 321 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ATG4AQ8WYN0 398 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ARHGEF26Q96DR7 871 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 MYEOVQ96EZ4 313 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 ALG14Q96F25 216 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CITED2Q99967 270 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 FEM1AQ9BSK4 669 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 THUMPD3Q9BV44 507 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 HEMGNQ9BXL5 484 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 CIPCQ9C0C6 399 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 TMEM245Q9H330 911 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 POLR1BQ9H9Y6 1135 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SEMA4GQ9NTN9 838 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 NTMQ9P121 344 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 MARCH4Q9P2E8 410 aaPredicted RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 KLQ9UEF7 1012 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 INTS6Q9UL03 887 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 PPIEQ9UNP9 301 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 PTRH2Q9Y3E5 179 aaKnown RBP5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 OR51B4Q9Y5P0 310 aa5.49□□□□□ -1.53
NHLRC3-205ENST00000485407 SESN1Q9Y6P5 492 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms