RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 LATO43561 262 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 PI15O43692 258 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 BCAS2O75934 225 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 PRPS2P11908 318 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 PCNAP12004 261 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 ATXN3P54252 364 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 TDGQ13569 410 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SMAD2Q15796 467 aaKnown RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 PYCR3Q53H96 274 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 TMEM31Q5JXX7 168 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 PRAMEF14Q5SWL7 426 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 PRAMEF13Q5VWM6 474 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SLC2A7Q6PXP3 512 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 GLB1L3Q8NCI6 653 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 DENND6BQ8NEG7 585 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 OR2T34Q8NGX1 318 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 CLHC1Q8NHS4 586 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 COLQQ9Y215 455 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 DLGAP4Q9Y2H0 992 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SOX1O00570 391 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 NME4O00746 187 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 ACOT8O14734 319 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 BAG2O95816 211 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 HSD3B1P14060 373 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 AMD1P17707 334 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SLC6A2P23975 617 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 HSD3B2P26439 372 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 DGKQP52824 942 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 CLDN2P57739 230 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 TRIM25Q14258 630 aaKnown RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 CATSPEREQ5SY80 951 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 ATG9BQ674R7 924 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 CAPRIN2Q6IMN6 1127 aaKnown RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 DUS1LQ6P1R4 473 aaKnown RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 MED27Q6P2C8 311 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 LRRC74BQ6ZQY2 392 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 DHDDSQ86SQ9 333 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 FLCNQ8NFG4 579 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 NUDT8Q8WV74 236 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SLC5A11Q8WWX8 675 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 REPS1Q96D71 796 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 APOLD1Q96LR9 279 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 C12orf66Q96MD2 445 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 EFCAB11Q9BUY7 163 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 SPATA6Q9NWH7 488 aaPredicted RBP16.16■□□□□ 0.18
CTSA-207ENST00000484855 VPS29Q9UBQ0 182 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 WDR37Q9Y2I8 494 aa16.16■□□□□ 0.18
CTSA-207ENST00000484855 POM121BA6NF01 834 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 FPGTO14772 594 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 C1GALT1C1LP0DN25 315 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 ACPPP15309 386 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 KIAA1024LP59773 190 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 SLBPQ14493 270 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTSA-207ENST00000484855 MLF2Q15773 248 aaPredicted RBP16.15■□□□□ 0.18
CTSA-207ENST00000484855 Q6ZS52 159 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 TBC1D21Q8IYX1 336 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 FAM9CQ8IZT9 166 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 DPP10Q8N608 796 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 KRTCAP2Q8N6L1 136 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 OR7G3Q8NG95 312 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 SETD7Q8WTS6 366 aaKnown RBP16.15■□□□□ 0.18
CTSA-207ENST00000484855 WDR34Q96EX3 536 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 PCDHAC1Q9H158 963 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 CLMPQ9H6B4 373 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 BRF2Q9HAW0 419 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 PLEKHM1Q9Y4G2 1056 aa16.15■□□□□ 0.18
CTSA-207ENST00000484855 KCNJ13O60928 360 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 NPPAP01160 153 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 HOXC4P09017 264 aaPredicted RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 ERGP11308 486 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 SDC1P18827 310 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 HNRNPA2B1P22626 353 aaKnown RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 GCKP35557 465 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 VHLP40337 213 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 ARHGAP19Q14CB8 494 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 FAM174BQ3ZCQ3 159 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 PAGE2BQ5JRK9 111 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 SLC15A3Q8IY34 581 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 PGBD3Q8N328 593 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 C2orf73Q8N5S3 287 aaPredicted RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 DNAJB14Q8TBM8 379 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 EHD1Q9H4M9 534 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 FGF22Q9HCT0 170 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 CMTM6Q9NX76 183 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 SPATA7Q9P0W8 599 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 CA5BQ9Y2D0 317 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 C15orf41Q9Y2V0 281 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 PRSS38A1L453 326 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 ZNF839A8K0R7 811 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 MAGEB17A8MXT2 336 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 MAN2B1O00754 1011 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 IL6P05231 212 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 HSD17B2P37059 387 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 MRPS22P82650 360 aaKnown RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 TRAP1Q12931 704 aaKnown RBP16.14■□□□□ 0.17
CTSA-207ENST00000484855 SPANXN4Q5MJ08 99 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 ADNP2Q6IQ32 1131 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 NOXRED1Q6NXP6 359 aa16.14■□□□□ 0.17
CTSA-207ENST00000484855 NXPE4Q6UWF7 544 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms