RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SMAD4Q13485 552 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TSTA3Q13630 321 aaPredicted RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 DDX39BQ13838 428 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SELPLGQ14242 412 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 AGERQ15109 404 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 LEXMQ3ZCV2 418 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SAMD4BQ5PRF9 694 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NANOGP8Q6NSW7 305 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM92Q6UXU6 159 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 FAM124AQ86V42 546 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 HM13Q8TCT9 377 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM125Q96AQ2 219 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PPM1MQ96MI6 270 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 WDR26Q9H7D7 661 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 CAAP1Q9H8G2 361 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 NANOGQ9H9S0 305 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 MRPL40Q9NQ50 206 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC6A13Q9NSD5 602 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 ASF1AQ9Y294 204 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 PLEKHM1Q9Y4G2 1056 aa8.56□□□□□ -1.04
CDC42SE1-204ENST00000483763 GON4LQ3T8J9 2241 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAGEB17A8MXT2 336 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 IFRD1O00458 451 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC31A1O15431 190 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SDC1P18827 310 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 IRX1P78414 480 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 MEF2AQ02078 507 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 STARD3Q14849 445 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 LIPJQ5W064 366 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 METRNLQ641Q3 311 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLCO4C1Q6ZQN7 724 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 CHST15Q7LFX5 561 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRRTM4Q86VH4 590 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPATA24Q86W54 205 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 IFNEQ86WN2 208 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 FBXO15Q8NCQ5 510 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR9A1PQ8NGU1 263 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 DNAJC9Q8WXX5 260 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLCO4A1Q96BD0 722 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 MRGPRX1Q96LB2 322 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 APOLD1Q96LR9 279 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TSSK3Q96PN8 268 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 EBPLQ9BY08 206 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC17A9Q9BYT1 436 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SPNS1Q9H2V7 528 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 PIF1Q9H611 641 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLMPQ9H6B4 373 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 RMI1Q9H9A7 625 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 VAPAQ9P0L0 249 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 LEF1Q9UJU2 399 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ANGPTL2Q9UKU9 493 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 EIF3LQ9Y262 564 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3DA0A087WVF3 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3IA0A087WXS9 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3EA0A087X179 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3KA0A087X1G2 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3FA6NER0 549 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 POM121BA6NF01 834 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3LB9A6J9 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 UGDHO60701 494 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRATO95237 230 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 DNTTP04053 509 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 PGRP06401 933 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 CEACAM5P06731 702 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3HP0C7X1 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 AMD1P17707 334 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ATP6V1B2P21281 511 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 IGFALSP35858 605 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 MTPNP58546 118 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 RPS21P63220 83 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TAF11Q15544 211 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 MUM1Q2TAK8 710 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3GQ6DHY5 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3CQ6IPX1 549 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 DUS1LQ6P1R4 473 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMPRSS11BQ86T26 416 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 KLHDC8AQ8IYD2 350 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TBC1D3Q8IZP1 549 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 DPP10Q8N608 796 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF740Q8NDX6 193 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR7G3Q8NG95 312 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 TFGQ92734 400 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 GFM2Q969S9 779 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 C11orf24Q96F05 449 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 NAF1Q96HR8 494 aaKnown RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 PHF7Q9BWX1 381 aaPredicted RBP8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 SGPP1Q9BX95 441 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 IKZF5Q9H5V7 419 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 GID8Q9NWU2 228 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ETAA1Q9NY74 926 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 PPT2Q9UMR5 302 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 ERVK-11Q9UQG0 969 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 CA5BQ9Y2D0 317 aa8.55□□□□□ -1.04
CDC42SE1-204ENST00000483763 H0Y8X5 98 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 H0YIV9 168 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 RNGTTO60942 597 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 C1QCP02747 245 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 ACP5P13686 325 aa8.54□□□□□ -1.04
CDC42SE1-204ENST00000483763 PRPH2P23942 346 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms