RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 RPS5P46782 204 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 HTR6P50406 440 aa4□□□□□ -1.77
VPS41-212ENST00000482217 CLCN3P51790 818 aa4□□□□□ -1.77
VPS41-212ENST00000482217 HNRNPFP52597 415 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 ATP5IP56385 69 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 DRP2Q13474 957 aa4□□□□□ -1.77
VPS41-212ENST00000482217 DMC1Q14565 340 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ZRSR1Q15695 479 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 SNAPC1Q16533 368 aa4□□□□□ -1.77
VPS41-212ENST00000482217 P3H1Q32P28 736 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ZSCAN23Q3MJ62 389 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ZNF311Q5JNZ3 666 aa4□□□□□ -1.77
VPS41-212ENST00000482217 FAM171A1Q5VUB5 890 aa4□□□□□ -1.77
VPS41-212ENST00000482217 LRRC66Q68CR7 880 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PMS2CLQ68D20 193 aa4□□□□□ -1.77
VPS41-212ENST00000482217 GRHL2Q6ISB3 625 aa4□□□□□ -1.77
VPS41-212ENST00000482217 HMBOX1Q6NT76 420 aa4□□□□□ -1.77
VPS41-212ENST00000482217 CEP85Q6P2H3 762 aa4□□□□□ -1.77
VPS41-212ENST00000482217 SLC29A4Q7RTT9 530 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ERASQ7Z444 233 aa4□□□□□ -1.77
VPS41-212ENST00000482217 NELFCDQ8IXH7 590 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PYROXD2Q8N2H3 581 aa4□□□□□ -1.77
VPS41-212ENST00000482217 FADS6Q8N9I5 356 aa4□□□□□ -1.77
VPS41-212ENST00000482217 NCOA7Q8NI08 942 aa4□□□□□ -1.77
VPS41-212ENST00000482217 GPT2Q8TD30 523 aa4□□□□□ -1.77
VPS41-212ENST00000482217 FAM46BQ96A09 425 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ESAMQ96AP7 390 aa4□□□□□ -1.77
VPS41-212ENST00000482217 SLC41A3Q96GZ6 507 aa4□□□□□ -1.77
VPS41-212ENST00000482217 BBC3Q96PG8 261 aaPredicted RBP4□□□□□ -1.77
VPS41-212ENST00000482217 TSG101Q99816 390 aa4□□□□□ -1.77
VPS41-212ENST00000482217 DUSP26Q9BV47 211 aa4□□□□□ -1.77
VPS41-212ENST00000482217 NUP58Q9BVL2 599 aa4□□□□□ -1.77
VPS41-212ENST00000482217 FBXO44Q9H4M3 255 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PDZD7Q9H5P4 517 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TDRD3Q9H7E2 651 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 SRD5A3Q9H8P0 318 aa4□□□□□ -1.77
VPS41-212ENST00000482217 RNPEPL1Q9HAU8 725 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TRPC7Q9HCX4 862 aa4□□□□□ -1.77
VPS41-212ENST00000482217 KCNK9Q9NPC2 374 aa4□□□□□ -1.77
VPS41-212ENST00000482217 FBXO28Q9NVF7 368 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TMLHEQ9NVH6 421 aa4□□□□□ -1.77
VPS41-212ENST00000482217 THAP1Q9NVV9 213 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ASNSD1Q9NWL6 643 aa4□□□□□ -1.77
VPS41-212ENST00000482217 KLHL28Q9NXS3 571 aa4□□□□□ -1.77
VPS41-212ENST00000482217 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
VPS41-212ENST00000482217 IL37Q9NZH6 218 aa4□□□□□ -1.77
VPS41-212ENST00000482217 TFCP2L1Q9NZI6 479 aa4□□□□□ -1.77
VPS41-212ENST00000482217 VPS54Q9P1Q0 977 aa4□□□□□ -1.77
VPS41-212ENST00000482217 THEGQ9P2T0 379 aa4□□□□□ -1.77
VPS41-212ENST00000482217 C11orf21Q9P2W6 132 aa4□□□□□ -1.77
VPS41-212ENST00000482217 MBD2Q9UBB5 411 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ONECUT1Q9UBC0 465 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PLA2G4CQ9UP65 541 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ENTPD4Q9Y227 616 aa4□□□□□ -1.77
VPS41-212ENST00000482217 CFL2Q9Y281 166 aa4□□□□□ -1.77
VPS41-212ENST00000482217 PADI2Q9Y2J8 665 aa4□□□□□ -1.77
VPS41-212ENST00000482217 ADCY9O60503 1353 aa4□□□□□ -1.77
VPS41-212ENST00000482217 A0A0B4J293 547 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TMEM120BA0PK00 339 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 LNP1A1A4G5 178 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 MAGEA13PA6NCF6 341 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 OR5K4A6NMS3 321 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 C12orf71A8MTZ7 269 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 E7ENQ6 273 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 FOXE1O00358 373 aaPredicted RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 SCAMP2O15127 329 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 ADAM12O43184 909 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TLX3O43711 291 aaPredicted RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 HBP1O60381 514 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 DFNA5O60443 496 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CSDE1O75534 798 aaKnown RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 RBBP9O75884 186 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CDK14O94921 469 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PGLSO95336 258 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CAVIN2O95810 425 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CXCL10P02778 98 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PGK2P07205 417 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CALCBP10092 127 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 G6PDP11413 515 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CYP4B1P13584 511 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ARSAP15289 507 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 UGT1A6P19224 532 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PTNP21246 168 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 MATN1P21941 496 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 PROZP22891 400 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 SP100P23497 879 aaPredicted RBP3.99□□□□□ -1.77
VPS41-212ENST00000482217 GPTP24298 496 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ITPKBP27987 946 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 THBS4P35443 961 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 TRIM23P36406 574 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 MAGEB1P43366 347 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 MMP13P45452 471 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ARHGDIAP52565 204 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 VBP1P61758 197 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 HNRNPKP61978 463 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS41-212ENST00000482217 PSG6Q00889 435 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 ECT2LQ008S8 904 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CNTN2Q02246 1040 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CFHR3Q02985 330 aa3.99□□□□□ -1.77
VPS41-212ENST00000482217 CXCL9Q07325 125 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms