RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 INPP5DQ92835 1189 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 ZNF669Q96BR6 464 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 FOPNLQ96NB1 174 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 BARD1Q99728 777 aaKnown RBP9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 SELENOSQ9BQE4 189 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 PLCD4Q9BRC7 762 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 ZNF552Q9H707 407 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 SYNPO2LQ9H987 977 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 PLAC1Q9HBJ0 212 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC6A20Q9NP91 592 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 CUTCQ9NTM9 273 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 TXLNGQ9NUQ3 528 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 GPR83Q9NYM4 423 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 ANKMY1Q9P2S6 941 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 PCYOX1Q9UHG3 505 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 FBXO5Q9UKT4 447 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 PYCARDQ9ULZ3 195 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 COMMD10Q9Y6G5 202 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 HEATR5BQ9P2D3 2071 aa9.3□□□□□ -0.92
TMEM39A-207ENST00000482162 COL12A1Q99715 3063 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 DOCK10Q96BY6 2186 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 RELNP78509 3460 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 A0A1W2PQ72 361 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 E7ENX8 843 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 AGPSO00116 658 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PEX12O00623 359 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SOCS6O14544 535 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 KIF5CO60282 957 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 NRP2O60462 931 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 DPM1O60762 260 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 HAUS5O94927 633 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC16A8O95907 504 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 MPC1LP0DKB6 136 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 ENO3P13929 434 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 ALAS2P22557 587 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 GABRB3P28472 473 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 OTX2P32243 289 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 FOXL2P58012 376 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 TAP2Q03519 686 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 NAA25Q14CX7 972 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 LONRF1Q17RB8 773 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 VWA5B1Q5TIE3 1220 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC6A19Q695T7 634 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 FRMPD2BQ6IN97 320 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PRMT9Q6P2P2 845 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 CASC4Q6P4E1 433 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 KIRREL2Q6UWL6 708 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 IGFL2Q6UWQ7 119 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 TTLL10Q6ZVT0 673 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PAQR7Q86WK9 346 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SPNS2Q8IVW8 549 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 CNTN4Q8IWV2 1026 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PPIL6Q8IXY8 311 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC35F6Q8N357 371 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 C2CD4AQ8NCU7 369 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 CD200R1Q8TD46 325 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 ZNF480Q8WV37 535 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PNPLA2Q96AD5 504 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PSMG3-AS1Q96PY0 264 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 OR2A5Q96R48 311 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PKP4Q99569 1192 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 MIPEPQ99797 713 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 AARSD1Q9BTE6 412 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 DPH7Q9BTV6 452 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 FAM114A2Q9NRY5 505 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SAMD15Q9P1V8 674 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 NDOR1Q9UHB4 597 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 GPN3Q9UHW5 284 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 NXT1Q9UKK6 140 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 SPTBN1Q01082 2364 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 PRRC2CQ9Y520 2896 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 HIVEP3Q5T1R4 2406 aa9.29□□□□□ -0.92
TMEM39A-207ENST00000482162 A6NL46 340 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 H0YGG7 62 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 GOLGA8MH3BSY2 632 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 TP73O15350 636 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 KLHL41O60662 606 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 CATP04040 527 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 CMPK1P30085 196 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC1A2P43004 574 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 PNLIPRP1P54315 467 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 VSX2P58304 361 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 ARF3P61204 181 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 ABATP80404 500 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 AIMP2Q13155 320 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 THOC5Q13769 683 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 SLC9A5Q14940 896 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 TTLL9Q3SXZ7 439 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 PLEKHN1Q494U1 663 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 HSP90AA5PQ58FG0 334 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 ICE2Q659A1 982 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 ATG9BQ674R7 924 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 Q6ZS92 163 aa9.28□□□□□ -0.92
TMEM39A-207ENST00000482162 GALNT7Q86SF2 657 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms