RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 LMNTD1Q8N9Z9 388 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ABHD11Q8NFV4 315 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 TTLQ8NG68 377 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 OR4F6Q8NGB9 312 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 OR4C6Q8NH72 309 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 METTL6Q8TCB7 284 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 SLC5A11Q8WWX8 675 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 CCT6BQ92526 530 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ESAMQ96AP7 390 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 PYCR2Q96C36 320 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 MAELQ96JY0 434 aaKnown RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 NSUN5Q96P11 429 aaKnown RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 ELAC2Q9BQ52 826 aaKnown RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 CCDC28BQ9BUN5 200 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 SARGQ9BW04 601 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GAREM1Q9H706 876 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 MEAF6Q9HAF1 191 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 TMEM184CQ9NVA4 438 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 RIC8BQ9NVN3 520 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GMEB2Q9UKD1 530 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ARL2BPQ9Y2Y0 163 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ASB1Q9Y576 335 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 PCDH15Q96QU1 1955 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 ARHGEF17Q96PE2 2063 aaPredicted RBP9.82□□□□□ -0.84
USP39-215ENST00000481409 PCM1Q15154 2024 aa9.82□□□□□ -0.84
USP39-215ENST00000481409 GOLGA8QA0A0J9YX86 632 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 A0A1W2PPV9 198 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 GOLGA8OA6NCC3 632 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 LRRC14BA6NHZ5 514 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 RHPN2P1A8MT19 583 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 NPIPB8E9PQR5 432 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 GOLGA8NF8WBI6 632 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SLC28A1O00337 649 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ULK1O75385 1050 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DCTN3O75935 186 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ZNF806P0C7X5 589 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 EPORP19235 508 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 MPSTP25325 297 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 GRK3P35626 688 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ARL1P40616 181 aaPredicted RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 DUSP3P51452 185 aaPredicted RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 CCR8P51685 355 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ARFIP2P53365 341 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 ERVPABLB-1P60509 514 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 GPLD1P80108 840 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 CHIT1Q13231 466 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SHBQ15464 509 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 C18orf21Q32NC0 220 aaPredicted RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 UGT3A2Q3SY77 523 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 XKR6Q5GH73 641 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ICE2Q659A1 982 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ARMC6Q6NXE6 501 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 LETMD1Q6P1Q0 360 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DUS1LQ6P1R4 473 aaKnown RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 EPGNQ6UW88 154 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 NXPE4Q6UWF7 544 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DBX2Q6ZNG2 339 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SLCO4C1Q6ZQN7 724 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SYVN1Q86TM6 617 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 LAS2Q8IYD9 372 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ADGRF3Q8IZF5 1079 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SLC25A45Q8N413 288 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 GBP7Q8N8V2 638 aaPredicted RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 LINC01555Q8NAE3 123 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 CCDC197Q8NCU1 140 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 OR4E2Q8NGC2 313 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 OR4K1Q8NGD4 311 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 OR52B6Q8NGF0 335 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 OR2A1Q8NGT9 310 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 NAT6Q93015 286 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ZUFSPQ96AP4 578 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 OR4K3Q96R72 315 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 CD180Q99467 661 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SLC38A3Q99624 504 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DPYSL5Q9BPU6 564 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 AIF1LQ9BQI0 150 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 LRFN3Q9BTN0 628 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 BRF2Q9HAW0 419 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DNAAF2Q9NVR5 837 aaKnown RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 PNPOQ9NVS9 261 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 NMRK1Q9NWW6 199 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 EPHA6Q9UF33 1036 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 ZNF225Q9UK10 706 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 SNX7Q9UNH6 387 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 TRIM33Q9UPN9 1127 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 DNAJC15Q9Y5T4 150 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 TDRD6O60522 2096 aaKnown RBP9.81□□□□□ -0.84
USP39-215ENST00000481409 TMEM131Q92545 1883 aa9.81□□□□□ -0.84
USP39-215ENST00000481409 TTC28Q96AY4 2481 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 ZNF318Q5VUA4 2279 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 KCNE1BA0A087WTH5 132 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 OR5K3A6NET4 321 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 FOXE1O00358 373 aaPredicted RBP9.8□□□□□ -0.84
USP39-215ENST00000481409 ZNF195O14628 629 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 TNFSF14O43557 240 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 CCDC22O60826 627 aa9.8□□□□□ -0.84
USP39-215ENST00000481409 UBXN7O94888 489 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms