RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 PCNX2A6NKB5 2137 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 RHPN2P1A8MT19 583 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 TMEM114B3SHH9 223 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 FLRT2O43155 660 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SH3BP5O60239 455 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 PRAMEF10O60809 474 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CBFA2T3O75081 653 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 H2AFYO75367 372 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 UBXN7O94888 489 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 OR4F21O95013 312 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 JUNP05412 331 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 PROS1P07225 676 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 NEFHP12036 1026 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CKMT1AP12532 417 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 HOXB3P14651 431 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 PVRP15151 417 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 GLB1P16278 677 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 POLR2CP19387 275 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LSP1P33241 339 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 PIK3CGP48736 1102 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 HTR6P50406 440 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 EPHA4P54764 986 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 GFERP55789 205 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 ABCE1P61221 599 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 GNGT1P63211 74 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SH3BP2P78314 561 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 MEF2AQ02078 507 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CDC16Q13042 620 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LCP2Q13094 533 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 STX3Q13277 289 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 RBBP7Q16576 425 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 AASDHQ4L235 1098 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CFAP157Q5JU67 520 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 TCHHL1Q5QJ38 904 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 ICE2Q659A1 982 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LCTLQ6UWM7 567 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SLCO4C1Q6ZQN7 724 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 EFL1Q7Z2Z2 1120 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CUZD1Q86UP6 607 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LRRC34Q8IZ02 419 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 ZNF781Q8N8C0 355 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 Q8N9G6 341 aaPredicted RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 OR2L3Q8NG85 312 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 OR4F6Q8NGB9 312 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LRRC8CQ8TDW0 803 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SETD7Q8WTS6 366 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CNDP2Q96KP4 475 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SLC38A3Q99624 504 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 CCDC3Q9BQI4 270 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 ABCG4Q9H172 646 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 STN1Q9H668 368 aaKnown RBP8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 MID1IP1Q9NPA3 183 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 FGFR1OP2Q9NVK5 253 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 LNPEPQ9UIQ6 1025 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 POMT2Q9UKY4 750 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 RNF11Q9Y3C5 154 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 PTGDR2Q9Y5Y4 395 aa8.64□□□□□ -1.03
NUDCD3-208ENST00000480209 SPTBP11277 2137 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 CEP250Q9BV73 2442 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 FER1L5A0AVI2 2057 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 MN1Q10571 1320 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 CPED1A4D0V7 1026 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 EME2A4GXA9 379 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 ISM1B1AKI9 464 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 KIF1CO43896 1103 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 EDF1O60869 148 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 SHOX2O60902 331 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 KATNA1O75449 491 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 WFS1O76024 890 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 HSPA4LO95757 839 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 EPB42P16452 691 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 CCND1P24385 295 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 GRK2P25098 689 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 CD1CP29017 333 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 ALDH4A1P30038 563 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 SERPINB5P36952 375 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 HSD17B2P37059 387 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 MLLT3P42568 568 aaPredicted RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 SEC24CP53992 1094 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 PCDH1Q08174 1060 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 ASPHQ12797 758 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 DOC2AQ14183 400 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 E2F2Q14209 437 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 KIR2DS3Q14952 304 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 ZIC1Q15915 447 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 THEMIS2Q5TEJ8 643 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 FCRL6Q6DN72 434 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 CLEC6AQ6EIG7 209 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 METTL2BQ6P1Q9 378 aaKnown RBP8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 SPESP1Q6UW49 350 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 GPRIN3Q6ZVF9 776 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 MAVSQ7Z434 540 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 PIP4P1Q86T03 277 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 OOSP2Q86WS3 158 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 TRIM42Q8IWZ5 723 aa8.63□□□□□ -1.03
NUDCD3-208ENST00000480209 RAB42Q8N4Z0 105 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms