RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 LIN9Q5TKA1 542 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LIPJQ5W064 366 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RAP1GAP2Q684P5 730 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SEL1L3Q68CR1 1132 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SLC30A6Q6NXT4 461 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 RPUSD3Q6P087 351 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 NOTUMQ6P988 496 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZCCHC12Q6PEW1 402 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 OGFOD3Q6PK18 319 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 DPP8Q6V1X1 898 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 C17orf107Q6ZR85 190 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TPGS1Q6ZTW0 290 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 BRINP3Q76B58 766 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 CHST3Q7LGC8 479 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 REC114Q7Z4M0 266 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TXNRD3Q86VQ6 643 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZC3HC1Q86WB0 502 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 PPIL6Q8IXY8 311 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ABI1Q8IZP0 508 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PYROXD2Q8N2H3 581 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 C9orf62Q8N4C0 152 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 C12orf45Q8N5I9 185 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 NANOGP1Q8N7R0 232 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF557Q8N988 423 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SMG8Q8ND04 991 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF248Q8NDW4 579 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 OR6X1Q8NH79 312 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 NDNFQ8TB73 568 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SNX33Q8WV41 574 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LRTOMTQ8WZ04 291 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TOP1MTQ969P6 601 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 MYLPFQ96A32 169 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 REPS1Q96D71 796 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 FAM193BQ96PV7 902 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SORBS1Q9BX66 1292 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 CEP41Q9BYV8 373 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PRRG3Q9BZD7 231 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TRIM2Q9C040 744 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 MS4A7Q9GZW8 240 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 MIR1-1HGQ9H1L0 117 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PPIL3Q9H2H8 161 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 BOLA2Q9H3K6 86 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ZNF768Q9H5H4 540 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SEBOXQ9HB31 216 aaPredicted RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 ASCL3Q9NQ33 180 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 ENTPD7Q9NQZ7 604 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 TMEM39AQ9NV64 488 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 LYARQ9NX58 379 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 SLC17A7Q9P2U7 560 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 SARDHQ9UL12 918 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PPIL1Q9Y3C6 166 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 U3KQV3 271 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 CCDC88AQ3V6T2 1871 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 PALLDQ8WX93 1383 aa4.05□□□□□ -1.76
CD55-208ENST00000476590 MARF1Q9Y4F3 1742 aaKnown RBP4.05□□□□□ -1.76
CD55-208ENST00000476590 FAM234BA2RU67 622 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 RGSL1A5PLK6 1076 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 MYMKA6NI61 221 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 METTL15A6NJ78 407 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TCP10L2B9ZVM9 353 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 NEDD8-MDP1E9PL57 170 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 G3V2T6 193 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SLC28A1O00337 649 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SOCS2O14508 198 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 PPEF2O14830 753 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TADA2AO75478 443 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 PAK4O96013 591 aaPredicted RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 IFNA2P01563 188 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 IFNGP01579 166 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ALPLP05186 524 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 C2P06681 752 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ADRB3P13945 408 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TCF4P15884 667 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 PAICSP22234 425 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 FGFR3P22607 806 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 CYP7A1P22680 504 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TNFSF4P23510 183 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ATP5A1P25705 553 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 SLC7A1P30825 629 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 GGT5P36269 586 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 RFC3P40938 356 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 WNT5AP41221 380 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 HNMTP50135 292 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 METAP2P50579 478 aaKnown RBP eCLIP4.04□□□□□ -1.76
CD55-208ENST00000476590 ARSFP54793 590 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 MAZP56270 477 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 GABARAPL2P60520 117 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TFAMQ00059 246 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 MAB21L1Q13394 359 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TUBB3Q13509 450 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SNTB1Q13884 538 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 INPP5AQ14642 412 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 MICBQ29980 383 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ADPRMQ3LIE5 342 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ATP13A5Q4VNC0 1218 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 EFHC2Q5JST6 749 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 C9orf152Q5JTZ5 239 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 PLA2G4FQ68DD2 849 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 VASNQ6EMK4 673 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms