RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 IQCKQ8N0W5 287 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 OR4N4Q8N0Y3 316 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 DTWD1Q8N5C7 304 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 TM9SF4Q92544 642 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 MAGOHBQ96A72 148 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 DPH7Q9BTV6 452 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 SLC29A3Q9BZD2 475 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 SLC6A20Q9NP91 592 aa21.55■■□□□ 1.04
C9orf3-213ENST00000471978 INTS10Q9NVR2 710 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 NXT1Q9UKK6 140 aaKnown RBP21.55■■□□□ 1.04
C9orf3-213ENST00000471978 FAM237BA0A1B0GVD1 139 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 CTAGE9A4FU28 777 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 SDR42E2A6NKP2 422 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 SOCS6O14544 535 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 NRDCO43847 1150 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 PSIP1O75475 530 aaKnown RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 MED26O95402 600 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 MLNP12872 115 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 NAA25Q14CX7 972 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 PRAMEF13Q5VWM6 474 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZNF470Q6ECI4 717 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 SUSD1Q6UWL2 747 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 RASGEF1CQ8N431 466 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZADH2Q8N4Q0 377 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZNF669Q96BR6 464 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 SNRNP40Q96DI7 357 aaKnown RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 C19orf60Q96EN9 201 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 MS4A14Q96JA4 679 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZFYVE21Q9BQ24 234 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ILKAPQ9H0C8 392 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZBTB20Q9HC78 741 aaPredicted RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 XAB2Q9HCS7 855 aaKnown RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 ZNF304Q9HCX3 659 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 FAM114A2Q9NRY5 505 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 HS3ST3B1Q9Y662 390 aa21.54■■□□□ 1.04
C9orf3-213ENST00000471978 SPTBN1Q01082 2364 aaKnown RBP21.54■■□□□ 1.04
C9orf3-213ENST00000471978 OR2A25A4D2G3 310 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 VSTM2BA6NLU5 285 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 GOLGA8MH3BSY2 632 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 MYO1CO00159 1063 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 ALOX12BO75342 701 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 USP1O94782 785 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 CATP04040 527 aaKnown RBP21.53■■□□□ 1.04
C9orf3-213ENST00000471978 ERVK-10P10266 1014 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 ERGP11308 486 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 RPA3P35244 121 aaPredicted RBP21.53■■□□□ 1.04
C9orf3-213ENST00000471978 CLCN7P51798 805 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 THOC5Q13769 683 aaKnown RBP21.53■■□□□ 1.04
C9orf3-213ENST00000471978 FBXO42Q6P3S6 717 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 KIRREL2Q6UWL6 708 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 MCUQ8NE86 351 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 SMPDL3AQ92484 453 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 PBKQ96KB5 322 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 MRPS30Q9NP92 439 aaKnown RBP21.53■■□□□ 1.04
C9orf3-213ENST00000471978 SEMA3GQ9NS98 782 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 JRKLQ9Y4A0 524 aa21.53■■□□□ 1.04
C9orf3-213ENST00000471978 F7P08709 466 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 COILP38432 576 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 CTBP1Q13363 440 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 MRPL49Q13405 166 aaKnown RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 TSTA3Q13630 321 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 ARHGAP19Q14CB8 494 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 RBBP7Q16576 425 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 EIF2S3LQ2VIR3 472 aaKnown RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 TTLL9Q3SXZ7 439 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 PRMT9Q6P2P2 845 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 DENND6AQ8IWF6 608 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 REXO1L1PQ8IX06 675 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 CISD2Q8N5K1 135 aaKnown RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 SERPINB12Q96P63 405 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 PKP4Q99569 1192 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 SLC30A3Q99726 388 aa21.52■■□□□ 1.04
C9orf3-213ENST00000471978 FBXO6Q9NRD1 293 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 STOX2Q9P2F5 926 aaPredicted RBP21.52■■□□□ 1.04
C9orf3-213ENST00000471978 ESPL1Q14674 2120 aa21.52■■□□□ 1.03
C9orf3-213ENST00000471978 NUP210LQ5VU65 1888 aa21.52■■□□□ 1.03
C9orf3-213ENST00000471978 PCM1Q15154 2024 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 SEMA7AO75326 666 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 HSD17B2P37059 387 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 PNLIPRP1P54315 467 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 OCA2Q04671 838 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 MUM1Q2TAK8 710 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 TUBB8Q3ZCM7 444 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 IRAK1BP1Q5VVH5 260 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 CCDC137Q6PK04 289 aaKnown RBP21.51■■□□□ 1.03
C9orf3-213ENST00000471978 NEK10Q6ZWH5 1172 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 VPS50Q96JG6 964 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 PLCD4Q9BRC7 762 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 CCDC68Q9H2F9 335 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 ASF1BQ9NVP2 202 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF282Q9UDV7 671 aaPredicted RBP21.51■■□□□ 1.03
C9orf3-213ENST00000471978 TAC3Q9UHF0 121 aa21.51■■□□□ 1.03
C9orf3-213ENST00000471978 ZCWPW2A0A1B0GU75 182 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 ZNF839A8K0R7 811 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 H0YGG7 62 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 PHF2O75151 1096 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 VPS26AO75436 327 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 ARF3P61204 181 aaPredicted RBP21.5■■□□□ 1.03
C9orf3-213ENST00000471978 KLC1Q07866 573 aa21.5■■□□□ 1.03
C9orf3-213ENST00000471978 CUL1Q13616 776 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms