RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 AASSQ9UDR5 926 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 PPT2Q9UMR5 302 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 CLDN25C9JDP6 229 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 PTPN6P29350 595 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 TMED10P49755 219 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 ZNF846Q147U1 533 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 NIPAL1Q6NVV3 410 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 BEND7Q8N7W2 519 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 HJURPQ8NCD3 748 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 POP5Q969H6 163 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 ZNF566Q969W8 418 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 SLC22A12Q96S37 553 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 KCTD5Q9NXV2 234 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 DNMT3BQ9UBC3 853 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 TBX21Q9UL17 535 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 ABCG2Q9UNQ0 655 aa15.36■□□□□ 0.05
TSPAN4-211ENST00000468468 MYO1GB0I1T2 1018 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 RFXANKO14593 260 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 ARHGEF15O94989 841 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 HOXB9P17482 250 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 HOXB6P17509 224 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 VASPP50552 380 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 GPR33Q49SQ1 333 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 CEP68Q76N32 757 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 ZNF551Q7Z340 670 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 BTLAQ7Z6A9 289 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 TSPAN33Q86UF1 283 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SLC22A15Q8IZD6 547 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SLC39A11Q8N1S5 342 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 DCAF4L2Q8NA75 395 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SETD9Q8NE22 299 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 RORBQ92753 470 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 EGLN2Q96KS0 407 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 ABCG8Q9H221 673 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 TMEM39AQ9NV64 488 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 STOML2Q9UJZ1 356 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SAMD4AQ9UPU9 718 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 PRRG1O14668 218 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 CCNDBP1O95273 360 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 PARNO95453 639 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SDC1P18827 310 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 MAGEA2P43356 314 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 MAP2K4P45985 399 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SLCO6A1Q86UG4 719 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 OR7A2PQ8NGA2 310 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 ZNF558Q96NG5 402 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 NEURL2Q9BR09 285 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SAGE1Q9NXZ1 904 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 HECAQ9UBI9 543 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 INTS6Q9UL03 887 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 SNX6Q9UNH7 406 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 PCDHGB1Q9Y5G3 927 aa15.35■□□□□ 0.05
TSPAN4-211ENST00000468468 TOR1BO14657 336 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 DAPP51397 102 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 ARHGDIAP52565 204 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 KCNC4Q03721 635 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 NPTX1Q15818 432 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 CYP2A13Q16696 494 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 OR4F3Q6IEY1 312 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 OR2T5Q6IEZ7 315 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 DNAJB7Q7Z6W7 309 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 B3GNT8Q7Z7M8 397 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 GPR26Q8NDV2 337 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 OR2T29Q8NH02 315 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TESCQ96BS2 214 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 APIPQ96GX9 242 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 EVPLLA8MZ36 301 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 M0QX08 132 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 C1QCP02747 245 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 CDH3P22223 829 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 ITGB8P26012 769 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 NSG1P42857 185 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 CLK3P49761 638 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 LSM3P62310 102 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 ACOX1Q15067 660 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TRIM16LQ309B1 348 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 RETSATQ6NUM9 610 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 ZCCHC8Q6NZY4 707 aaKnown RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TPGS1Q6ZTW0 290 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 UBE2R2Q712K3 238 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TMEM150AQ86TG1 271 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 SKA2Q8WVK7 121 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TOX2Q96NM4 488 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 HMG20AQ9NP66 347 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 AASDHPPTQ9NRN7 309 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 TPRKBQ9Y3C4 175 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 PCDHGA10Q9Y5H3 936 aa15.34■□□□□ 0.05
TSPAN4-211ENST00000468468 DIRAS1O95057 198 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 GABARAPO95166 117 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 UGT2B4P06133 528 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CBSLP0DN79 551 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CCR7P32248 378 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CBSP35520 551 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 ZXDCQ2QGD7 858 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 CCDC81Q6ZN84 652 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 GALNT10Q86SR1 603 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 ZSWIM9Q86XI8 627 aa15.33■□□□□ 0.04
TSPAN4-211ENST00000468468 FAM9CQ8IZT9 166 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms