RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 PAQR7Q86WK9 346 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 MCATQ8IVS2 390 aaKnown RBP16.98■□□□□ 0.31
VPS52-214ENST00000463486 SYTL1Q8IYJ3 562 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 EIF1ADQ8N9N8 165 aaKnown RBP16.98■□□□□ 0.31
VPS52-214ENST00000463486 SLC44A1Q8WWI5 657 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 TSPAN17Q96FV3 270 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 LRFN5Q96NI6 719 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 DPH7Q9BTV6 452 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 DERL2Q9GZP9 239 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 TAC3Q9UHF0 121 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 SERTAD3Q9UJW9 196 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 SH2B3Q9UQQ2 575 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 HEATR5BQ9P2D3 2071 aa16.98■□□□□ 0.31
VPS52-214ENST00000463486 NPEPPSL1A6NEC2 478 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 MAP3K7O43318 606 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 CPNE3O75131 537 aaKnown RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 SLC35E2BP0CK96 405 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 CD1DP15813 335 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 NPPBP16860 134 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 STMN1P16949 149 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 RPA3P35244 121 aaPredicted RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 ATP1A2P50993 1020 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 TBPL1P62380 186 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 DLG1Q12959 904 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 SLMAPQ14BN4 828 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 TSNQ15631 228 aaKnown RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 MANEAQ5SRI9 462 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 BROXQ5VW32 411 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 LCN10Q6JVE6 187 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 RNF44Q7L0R7 432 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 CMC1Q7Z7K0 106 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 TMEM126BQ8IUX1 230 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 IL22RA1Q8N6P7 574 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 OR56A3Q8NH54 315 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 FBXL8Q96CD0 374 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 MRRFQ96E11 262 aaKnown RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 PLCD4Q9BRC7 762 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 ATG10Q9H0Y0 220 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 ANKZF1Q9H8Y5 726 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 FANCEQ9HB96 536 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 LHX9Q9NQ69 397 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 PCMTD2Q9NV79 361 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 INTS7Q9NVH2 962 aaKnown RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 CUEDC1Q9NWM3 386 aaPredicted RBP16.97■□□□□ 0.31
VPS52-214ENST00000463486 IL17BQ9UHF5 180 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 PADI1Q9ULC6 663 aa16.97■□□□□ 0.31
VPS52-214ENST00000463486 PIEZO2Q9H5I5 2752 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 ZNF749O43361 778 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 OR2B3O76000 313 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 CAPN1P07384 714 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 CCDC166P0CW27 439 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 GCAP28676 217 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 CMPK1P30085 196 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 KCNC1P48547 511 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 SLC12A2P55011 1212 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 CXADRP78310 365 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 ABATP80404 500 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 NAE1Q13564 534 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 BMPR2Q13873 1038 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 FRMPD2BQ6IN97 320 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 FAM199XQ6PEV8 388 aaPredicted RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 CCDC81Q6ZN84 652 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 GSPT2Q8IYD1 628 aaKnown RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 DSELQ8IZU8 1212 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 PTERQ96BW5 349 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 OR4K3Q96R72 315 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 UNKQ9C0B0 810 aaKnown RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 ACTR5Q9H9F9 607 aaPredicted RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 MRPS30Q9NP92 439 aaKnown RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 ARL15Q9NXU5 204 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 UTP6Q9NYH9 597 aaKnown RBP16.96■□□□□ 0.31
VPS52-214ENST00000463486 ANKMY1Q9P2S6 941 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 OARD1Q9Y530 152 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 PCDHGA4Q9Y5G9 962 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 FER1L5A0AVI2 2057 aa16.96■□□□□ 0.31
VPS52-214ENST00000463486 LOC105369274A0A096LPK9 316 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 LOC102723532A0A0G2JNH3 316 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 FITM1A5D6W6 292 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 E7EQ34 232 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 MEN1O00255 615 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 RIPK2O43353 540 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 MT-ND3P03897 115 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 ALDOAP04075 364 aaKnown RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 ABHD2P08910 425 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 HIST1H2AGP0C0S8 130 aaPredicted RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 HIST1H2ADP20671 130 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 TNFRSF8P28908 595 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 CDKL1Q00532 357 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 RELAQ04206 551 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 OR4D1Q15615 310 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 TEX35Q5T0J7 233 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 MROH9Q5TGP6 573 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 TRMT10CQ7L0Y3 403 aaKnown RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 CENPLQ8N0S6 344 aaPredicted RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 OR4N4Q8N0Y3 316 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 UHMK1Q8TAS1 419 aaKnown RBP16.95■□□□□ 0.3
VPS52-214ENST00000463486 DCAKDQ8WVC6 231 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 ISL2Q96A47 359 aa16.95■□□□□ 0.3
VPS52-214ENST00000463486 SLC45A3Q96JT2 553 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms