RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 IRF4Q15306 451 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 TLR1Q15399 786 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 TMEM259Q4ZIN3 620 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 SWT1Q5T5J6 900 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 ATG9BQ674R7 924 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 CWF19L1Q69YN2 538 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 KIAA1211LQ6NV74 962 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 MED27Q6P2C8 311 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 DOK6Q6PKX4 331 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 LAYNQ6UX15 382 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 LRRC74BQ6ZQY2 392 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 C11orf96Q7Z7L8 435 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 HID1Q8IV36 788 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 TBC1D21Q8IYX1 336 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 LIX1Q8N485 282 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 FOXJ1Q92949 421 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 MTFMTQ96DP5 389 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 WDR34Q96EX3 536 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 IER2Q9BTL4 223 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 SGPP1Q9BX95 441 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 MKRN2Q9H000 416 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 TRIT1Q9H3H1 467 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 CCDC177Q9NQR7 707 aaPredicted RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 C6orf203Q9P0P8 240 aaPredicted RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 DLGAP2Q9P1A6 1054 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 ABCD2Q9UBJ2 740 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 GULP1Q9UBP9 304 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 CD300AQ9UGN4 299 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 ADGRE2Q9UHX3 823 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 PSMD13Q9UNM6 376 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 ZFR2Q9UPR6 939 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 RUVBL1Q9Y265 456 aaKnown RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
NUP85-202ENST00000449421 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
NUP85-202ENST00000449421 A0A1W2PQF6 199 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 ACOT8O14734 319 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 NVLO15381 856 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 ADAM23O75077 832 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 KCNH1O95259 989 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 CD1EP15812 388 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 XRCC1P18887 633 aaPredicted RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 IDSP22304 550 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 SLC7A2P52569 658 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 PWP1Q13610 501 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 GAS6Q14393 721 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 KIAA0040Q15053 153 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 DPY19L1Q2PZI1 675 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 ZXDCQ2QGD7 858 aaPredicted RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 MUM1Q2TAK8 710 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 USP39Q53GS9 565 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 CMPK2Q5EBM0 449 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 IRAK1BP1Q5VVH5 260 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 LCTLQ6UWM7 567 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 MSANTD1Q6ZTZ1 278 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 RETREG3Q86VR2 466 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 DHFR2Q86XF0 187 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 KRT78Q8N1N4 520 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 LILRA3Q8N6C8 439 aaPredicted RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 CATSPER1Q8NEC5 780 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 TNIP2Q8NFZ5 429 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 WDR20Q8TBZ3 569 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 POP5Q969H6 163 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 TACO1Q9BSH4 297 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 APOOQ9BUR5 198 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 RAB11FIP5Q9BXF6 653 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 COL25A1Q9BXS0 654 aaPredicted RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 ACPTQ9BZG2 426 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 PITHD1Q9GZP4 211 aaPredicted RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 CHRDQ9H2X0 955 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 SGK2Q9HBY8 427 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 MBNL1Q9NR56 388 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 FARSBQ9NSD9 589 aaKnown RBP12.17□□□□□ -0.46
NUP85-202ENST00000449421 SERGEFQ9UGK8 458 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 MMP17Q9ULZ9 603 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 TSC22D4Q9Y3Q8 395 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 TRIOO75962 3097 aa12.17□□□□□ -0.46
NUP85-202ENST00000449421 AQP12BA6NM10 295 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 E7EQ34 232 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 FOXE1O00358 373 aaPredicted RBP12.16□□□□□ -0.46
NUP85-202ENST00000449421 FPGTO14772 594 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 ANKRD28O15084 1053 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 GMNNO75496 209 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 BCKDHAP12694 445 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 NPPBP16860 134 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 AMD1P17707 334 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 PRPS1L1P21108 318 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 SERPINB1P30740 379 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 DPP6P42658 865 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 ASMTP46597 345 aa12.16□□□□□ -0.46
NUP85-202ENST00000449421 HNRNPFP52597 415 aaKnown RBP12.16□□□□□ -0.46
NUP85-202ENST00000449421 SESN3P58005 492 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms