RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 PRSS33Q8NF86 280 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 ABHD11Q8NFV4 315 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 OR4E2Q8NGC2 313 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 SLC5A11Q8WWX8 675 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 CDK15Q96Q40 435 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 CCT7Q99832 543 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 ACTR8Q9H981 624 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 IL21RQ9HBE5 538 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 DYRK1BQ9Y463 629 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 ENTPD2Q9Y5L3 495 aa18.6■□□□□ 0.57
RPS28-202ENST00000449223 E7EQ34 232 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 KHNYNO15037 678 aaKnown RBP18.59■□□□□ 0.57
RPS28-202ENST00000449223 PPM1DO15297 605 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 NUDT21O43809 227 aaKnown RBP18.59■□□□□ 0.57
RPS28-202ENST00000449223 HGFP14210 728 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ENGP17813 658 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 HNF4AP41235 474 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ABATP80404 500 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 PLCL1Q15111 1095 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 CLEC6AQ6EIG7 209 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 LMNTD1Q8N9Z9 388 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 KYQ8NBH2 561 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 RFWD2Q8NHY2 731 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 AGR3Q8TD06 166 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 C10orf82Q8WW14 230 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 PTCD3Q96EY7 689 aaKnown RBP18.59■□□□□ 0.57
RPS28-202ENST00000449223 TAC3Q9UHF0 121 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 RNF11Q9Y3C5 154 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 HEATR5BQ9P2D3 2071 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 BTN3A3O00478 584 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 SNRNP200O75643 2136 aaKnown RBP18.59■□□□□ 0.57
RPS28-202ENST00000449223 FKBP9O95302 570 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 CAPN1P07384 714 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ALPPL2P10696 532 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 JUPP14923 745 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 CD22P20273 847 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 EPHA4P54764 986 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 IRF8Q02556 426 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ZNF33BQ06732 778 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 CHIT1Q13231 466 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 THEMIS2Q5TEJ8 643 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ICE2Q659A1 982 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 GRHL2Q6ISB3 625 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 EPGNQ6UW88 154 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 C17orf64Q86WR6 236 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 SLC35F3Q8IY50 421 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 CDYL2Q8N8U2 506 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 ANKS4BQ8N8V4 417 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 FLVCR1-AS1Q8TAF5 88 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 MAELQ96JY0 434 aaKnown RBP18.59■□□□□ 0.57
RPS28-202ENST00000449223 KCNA7Q96RP8 456 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 EFCAB11Q9BUY7 163 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 IRF2BPLQ9H1B7 796 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 RABEP2Q9H5N1 569 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 MEAF6Q9HAF1 191 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 PELI2Q9HAT8 420 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 SH2B3Q9UQQ2 575 aa18.59■□□□□ 0.57
RPS28-202ENST00000449223 RALGAPA1Q6GYQ0 2036 aa18.58■□□□□ 0.57
RPS28-202ENST00000449223 GOLGA4Q13439 2230 aaKnown RBP18.58■□□□□ 0.56
RPS28-202ENST00000449223 TRPC5OSA6NMA1 111 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 H0YIV9 168 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 CCNDBP1O95273 360 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 CHEK2O96017 543 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 C1GALT1C1LP0DN25 315 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 GLB1P16278 677 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 AQP5P55064 265 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 DOC2AQ14183 400 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 XKR6Q5GH73 641 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 C10orf62Q5T681 223 aaPredicted RBP18.58■□□□□ 0.56
RPS28-202ENST00000449223 NXPE4Q6UWF7 544 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 FAM129CQ86XR2 697 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 DCBLD1Q8N8Z6 715 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 OR4K1Q8NGD4 311 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 METTL6Q8TCB7 284 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 TWIST2Q8WVJ9 160 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 USP7Q93009 1102 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 PITHD1Q9GZP4 211 aaPredicted RBP18.58■□□□□ 0.56
RPS28-202ENST00000449223 KCNH6Q9H252 994 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 SPHK1Q9NYA1 384 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.58■□□□□ 0.56
RPS28-202ENST00000449223 PCDHGB2Q9Y5G2 931 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 KLK4Q9Y5K2 254 aa18.58■□□□□ 0.56
RPS28-202ENST00000449223 SERTM1A2A2V5 107 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 PIPSLA2A3N6 862 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 OR5K3A6NET4 321 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 RRP9O43818 475 aaKnown RBP18.57■□□□□ 0.56
RPS28-202ENST00000449223 JUNP05412 331 aaKnown RBP18.57■□□□□ 0.56
RPS28-202ENST00000449223 ZNF806P0C7X5 589 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 HRH2P25021 359 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 PSMB5P28074 263 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 GPR3P46089 330 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 TSTA3Q13630 321 aaPredicted RBP18.57■□□□□ 0.56
RPS28-202ENST00000449223 KLHL35Q6PF15 583 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 DBX2Q6ZNG2 339 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 TMPRSS11BQ86T26 416 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 GATAD2AQ86YP4 633 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 C2orf73Q8N5S3 287 aaPredicted RBP18.57■□□□□ 0.56
RPS28-202ENST00000449223 OR2L3Q8NG85 312 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 OR6C4Q8NGE1 309 aa18.57■□□□□ 0.56
RPS28-202ENST00000449223 DNAAF2Q9NVR5 837 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms