RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FDXRP22570 491 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 IMPA1P29218 277 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SSTR1P30872 391 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PLTPP55058 493 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 VSX2P58304 361 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 IL2P60568 153 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 DCDP81605 110 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PRDX1Q06830 199 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 KCNAB2Q13303 367 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 IL10RAQ13651 578 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 NCF4Q15080 339 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 WASHC2DQ5SRD0 308 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ICE2Q659A1 982 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 FRMPD2BQ6IN97 320 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 LRRC8EQ6NSJ5 796 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PALM2Q8IXS6 379 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PROKR1Q8TCW9 393 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 MCOLN3Q8TDD5 553 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SEC14L1Q92503 715 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 LINGO1Q96FE5 620 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF285Q96NJ3 590 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SELENOSQ9BQE4 189 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PARVBQ9HBI1 364 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SAYSD1Q9NPB0 183 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SMYD2Q9NRG4 433 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ENAMQ9NRM1 1142 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 TXLNGQ9NUQ3 528 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ABCF3Q9NUQ8 709 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 TAC3Q9UHF0 121 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SRPK3Q9UPE1 567 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 COL6A6A6NMZ7 2263 aa12.21□□□□□ -0.46
PRPF40A-203ENST00000448428 ATRXP46100 2492 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 B8ZZF3 427 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 C9J4A7 227 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 EIF3HO15372 352 aaKnown RBP eCLIP12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 KLF7O75840 302 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 C8GP07360 202 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 ARSFP54793 590 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC7A5Q01650 507 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 GRM7Q14831 915 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 NKAIN1Q4KMZ8 207 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 TCTE1Q5JU00 501 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 MLIPQ5VWP3 458 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 FAM45BPQ6NSW5 357 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 TMEM207Q6UWW9 146 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF605Q86T29 641 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC26A11Q86WA9 606 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 ZC3HC1Q86WB0 502 aaKnown RBP12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 MYO1HQ8N1T3 1032 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 FAM45AQ8TCE6 357 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 ADAMTS17Q8TE56 1095 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 CCDC138Q96M89 665 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 MCMBPQ9BTE3 642 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 RAB17Q9H0T7 212 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 STOX2Q9P2F5 926 aaPredicted RBP12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 TUBD1Q9UJT1 453 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 SNX7Q9UNH6 387 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 MAN2B2Q9Y2E5 1009 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 MED13Q9UHV7 2174 aa12.2□□□□□ -0.46
PRPF40A-203ENST00000448428 FAM95CA0A1B0GW59 222 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 FITM1A5D6W6 292 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 CXorf49A8MYA2 514 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 DSCR3O14972 297 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC16A5O15375 505 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ITGAXP20702 1163 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 SAT1P21673 171 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 CAV1Q03135 178 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 CKAP4Q07065 602 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 SP140Q13342 867 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 SLC9A5Q14940 896 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 NAA25Q14CX7 972 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 PHKG1Q16816 387 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 THEMIS2Q5TEJ8 643 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 YOD1Q5VVQ6 348 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF425Q6IV72 752 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 AGTRAPQ6RW13 159 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ZDHHC24Q6UX98 284 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 MBOAT1Q6ZNC8 495 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 C3orf62Q6ZUJ4 267 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 TMEM151BQ8IW70 566 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 TTC29Q8NA56 475 aaPredicted RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 FBXO25Q8TCJ0 367 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 THAP4Q8WY91 577 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ZNF592Q92610 1267 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 PDLIM5Q96HC4 596 aaKnown RBP12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 ZFYVE21Q9BQ24 234 aa12.19□□□□□ -0.46
PRPF40A-203ENST00000448428 LRRC1Q9BTT6 524 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms