RNA–Protein interactions for RNA: ENST00000445237.2

HDAC7-214, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 364 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-214ENST00000445237 COILP38432 576 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 CTBP1Q13363 440 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 MRPL49Q13405 166 aaKnown RBP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 CUL1Q13616 776 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 THOC5Q13769 683 aaKnown RBP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 FAM214AQ32MH5 1076 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 YOD1Q5VVQ6 348 aaPredicted RBP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 FBXO42Q6P3S6 717 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 PRSS58Q8IYP2 241 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 AGGF1Q8N302 714 aaeCLIP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 PSMG3-AS1Q96PY0 264 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 PKP4Q99569 1192 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 ENAMQ9NRM1 1142 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 INTS10Q9NVR2 710 aaKnown RBP17.03■□□□□ 0.32
HDAC7-214ENST00000445237 HS3ST3B1Q9Y662 390 aa17.03■□□□□ 0.32
HDAC7-214ENST00000445237 ZCWPW2A0A1B0GU75 182 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 OR2A25A4D2G3 310 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SDR42E2A6NKP2 422 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 MYO1CO00159 1063 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SOCS6O14544 535 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 KIF5CO60282 957 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 PSIP1O75475 530 aaKnown RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ERGP11308 486 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 MLNP12872 115 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 GP1BBP13224 206 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ITGA3P26006 1051 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 CMPK1P30085 196 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 RPA3P35244 121 aaPredicted RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 CLCN7P51798 805 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ZNF549Q6P9A3 640 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 CCDC137Q6PK04 289 aaKnown RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 KIRREL2Q6UWL6 708 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 RNF44Q7L0R7 432 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 REXO1L1PQ8IX06 675 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 CISD2Q8N5K1 135 aaKnown RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 PPFIBP2Q8ND30 876 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SMPDL3AQ92484 453 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SNRNP40Q96DI7 357 aaKnown RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 PBKQ96KB5 322 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SERPINB12Q96P63 405 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ZFYVE21Q9BQ24 234 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SLC26A1Q9H2B4 701 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 XAB2Q9HCS7 855 aaKnown RBP17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ZNF304Q9HCX3 659 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 B3GNT3Q9Y2A9 372 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 MED16Q9Y2X0 877 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 NEU2Q9Y3R4 380 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 JRKLQ9Y4A0 524 aa17.02■□□□□ 0.32
HDAC7-214ENST00000445237 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.31
HDAC7-214ENST00000445237 IGKV1-8A0A0C4DH67 115 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 MAGEB16A2A368 324 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 SEMA7AO75326 666 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 CATP04040 527 aaKnown RBP17.01■□□□□ 0.31
HDAC7-214ENST00000445237 SOX8P57073 446 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 AIMP2Q13155 320 aaKnown RBP17.01■□□□□ 0.31
HDAC7-214ENST00000445237 RBBP7Q16576 425 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 EIF2S3LQ2VIR3 472 aaKnown RBP17.01■□□□□ 0.31
HDAC7-214ENST00000445237 FHL5Q5TD97 284 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 PARP9Q8IXQ6 854 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 IQCKQ8N0W5 287 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 MCUQ8NE86 351 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 INPP5DQ92835 1189 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 C10orf90Q96M02 699 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 LRRC4CQ9HCJ2 640 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 MRPS30Q9NP92 439 aaKnown RBP17.01■□□□□ 0.31
HDAC7-214ENST00000445237 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 C20orf96Q9NUD7 363 aaPredicted RBP17.01■□□□□ 0.31
HDAC7-214ENST00000445237 ASF1BQ9NVP2 202 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 TAC3Q9UHF0 121 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 VPS9D1Q9Y2B5 631 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 CSAG2Q9Y5P2 127 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 MAD1L1Q9Y6D9 718 aa17.01■□□□□ 0.31
HDAC7-214ENST00000445237 VSTM2BA6NLU5 285 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 H0YGG7 62 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 NRDCO43847 1150 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 SLC16A8O95907 504 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 SYF2O95926 243 aaKnown RBP17■□□□□ 0.31
HDAC7-214ENST00000445237 ERVK-10P10266 1014 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 SLC1A2P43004 574 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 PNLIPRP1P54315 467 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 ARF3P61204 181 aaPredicted RBP17■□□□□ 0.31
HDAC7-214ENST00000445237 SPTAN1Q13813 2472 aaKnown RBP17■□□□□ 0.31
HDAC7-214ENST00000445237 CYP1B1Q16678 543 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 TTLL9Q3SXZ7 439 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 PRAMEF13Q5VWM6 474 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 ARMC3Q5W041 872 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 IGFL3Q6UXB1 125 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 PAQR7Q86WK9 346 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 ZADH2Q8N4Q0 377 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 STT3BQ8TCJ2 826 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 COG1Q8WTW3 980 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 NACC2Q96BF6 587 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 CRB3Q9BUF7 120 aa17■□□□□ 0.31
HDAC7-214ENST00000445237 ILKAPQ9H0C8 392 aaPredicted RBP17■□□□□ 0.31
HDAC7-214ENST00000445237 NXT1Q9UKK6 140 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms