RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SLC13A3Q8WWT9 602 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ACOT12Q8WYK0 555 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 OR2M2Q96R28 347 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PANX1Q96RD7 426 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MXRA8Q9BRK3 442 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ZBTB20Q9HC78 741 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TCF7L1Q9HCS4 588 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 C1orf109Q9NX04 203 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 OPTCQ9UBM4 332 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 EVLQ9UI08 416 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 RUVBL1Q9Y265 456 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TEX13CA0A0J9YWL9 993 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 GNG14A0A1W2PPG7 69 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ULK1O75385 1050 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 HTR3BO95264 441 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 DSG3P32926 999 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CRATP43155 626 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 HTR3AP46098 478 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MEOX2P50222 304 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TEKQ02763 1124 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 DDX39BQ13838 428 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 NHSL2Q5HYW2 709 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 BCL2L15Q5TBC7 163 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 IRAK1BP1Q5VVH5 260 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PRAMEF13Q5VWM6 474 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MTSS1LQ765P7 747 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 GPR156Q8NFN8 814 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 NANPQ8TBE9 248 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PIGKQ92643 395 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MGLLQ99685 303 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 OR51J1Q9H342 316 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TBC1D17Q9HA65 648 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 EMC7Q9NPA0 242 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ADARB2Q9NS39 739 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 EXTL2Q9UBQ6 330 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 POLLQ9UGP5 575 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CORINQ9Y5Q5 1042 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CREBL2O60519 120 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF254O75437 659 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ADRB1P08588 477 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 KLRK1P26718 216 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 KCNC1P48547 511 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 LAPTM5Q13571 262 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 AANATQ16613 207 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MSS51Q4VC12 460 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 C4orf46Q504U0 113 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PRAMEF17Q5VTA0 474 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ELP2Q6IA86 826 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CXorf57Q6NSI4 855 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 WDR53Q7Z5U6 358 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 FAM131BQ86XD5 332 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 OR10G2Q8NGC3 310 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ZFPM2Q8WW38 1151 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SMARCD1Q96GM5 515 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TMEM80Q96HE8 168 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 RADILQ96JH8 1075 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MGME1Q9BQP7 344 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MRPL45Q9BRJ2 306 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CRB3Q9BUF7 120 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SNRNP25Q9BV90 132 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SDHAF2Q9NX18 166 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 DCAF16Q9NXF7 216 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 FEM1BQ9UK73 627 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 COPS3Q9UNS2 423 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ERVK-19Q9WJR5 959 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PCDHGB5Q9Y5G0 923 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 FKBP7Q9Y680 259 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SHOXO15266 292 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 KCNJ13O60928 360 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SLC43A1O75387 559 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SCO1O75880 301 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 SLITRK3O94933 977 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 RB1P06400 928 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ZP3P21754 424 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 RPS12P25398 132 aaKnown RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MLLT6P55198 1093 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 EMX1Q04741 257 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 C2orf80Q0P641 193 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ST3GAL4Q11206 333 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 GRIN2CQ14957 1233 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PEA15Q15121 130 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 LRRC26Q2I0M4 334 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 HACD4Q5VWC8 232 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 FAM122BQ7Z309 247 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TSPYL5Q86VY4 417 aaPredicted RBP5.03□□□□□ -1.6
SCN11A-202ENST00000444237 TMEM161BQ8NDZ6 487 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 OR52L1Q8NGH7 329 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 KIF12Q96FN5 646 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PYURFQ96I23 114 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 HPDLQ96IR7 371 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 ZNF225Q9UK10 706 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 CLEC4AQ9UMR7 237 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 VWA7Q9Y334 891 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 RGPD5Q99666 1765 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 MYH10P35580 1976 aa5.03□□□□□ -1.6
SCN11A-202ENST00000444237 PRORSD1PA6NEY8 169 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MCIDASD6RGH6 385 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SRPRAP08240 638 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms