RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ZNF839A8K0R7 811 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 KIF5CO60282 957 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 NRP2O60462 931 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 IPO13O94829 963 aaKnown RBP15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 VARSP26640 1264 aaKnown RBP15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 CTBP1Q13363 440 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 LONRF1Q17RB8 773 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 FRMPD2BQ6IN97 320 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 PRMT9Q6P2P2 845 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 IGFL3Q6UXB1 125 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 AGGF1Q8N302 714 aaeCLIP15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 COG1Q8WTW3 980 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 OSBPL9Q96SU4 736 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 SLC30A3Q99726 388 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 DPH7Q9BTV6 452 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 CCDC68Q9H2F9 335 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 SLC6A20Q9NP91 592 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 SLAMF7Q9NQ25 335 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 FBXO6Q9NRD1 293 aaPredicted RBP15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 PCM1Q15154 2024 aa15.56■□□□□ 0.08
SNRPD3-204ENST00000439775 LOC105369274A0A096LPK9 316 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 LOC102723532A0A0G2JNH3 316 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 A0A0J9YVX5 310 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 HYKKA2RU49 373 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 VSTM2BA6NLU5 285 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 VPS26AO75436 327 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 CCNDBP1O95273 360 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 MPC1LP0DKB6 136 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ENO3P13929 434 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 RPA3P35244 121 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 EMP3P54852 163 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 AIMP2Q13155 320 aaKnown RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 INPP5JQ15735 1006 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ZNF549Q6P9A3 640 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 TMEM151BQ8IW70 566 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 PPIL6Q8IXY8 311 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 OR4N4Q8N0Y3 316 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 SLC35F6Q8N357 371 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ASB11Q8WXH4 323 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 SIGLEC10Q96LC7 697 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 PLCD4Q9BRC7 762 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 FAM167BQ9BTA0 163 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ACAT2Q9BWD1 397 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ZNF552Q9H707 407 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 MRPS30Q9NP92 439 aaKnown RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 ATP13A2Q9NQ11 1180 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 SEMA3GQ9NS98 782 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 C20orf96Q9NUD7 363 aaPredicted RBP15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 CTSFQ9UBX1 484 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 CDC23Q9UJX2 597 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 FBXL4Q9UKA2 621 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 SNX12Q9UMY4 172 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 HS3ST3B1Q9Y662 390 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
SNRPD3-204ENST00000439775 IGKV1-8A0A0C4DH67 115 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 GFYI3L273 518 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 EIF3FO00303 357 aaPredicted RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 SOCS6O14544 535 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 ZSCAN12O43309 604 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 SLC16A8O95907 504 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 ERVK-10P10266 1014 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 OR1D4P47884 311 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 UQCRFS1P47985 274 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 PNLIPRP1P54315 467 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 YBX1P67809 324 aaKnown RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 RELAQ04206 551 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 PRDX1Q06830 199 aaKnown RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 MUM1Q2TAK8 710 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 PRTGQ2VWP7 1150 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 RNASEH2BQ5TBB1 312 aaKnown RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 ICE2Q659A1 982 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 SUSD1Q6UWL2 747 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 ZNF480Q8WV37 535 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 TM9SF4Q92544 642 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 C10orf90Q96M02 699 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 PKP4Q99569 1192 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 MFRPQ9BY79 579 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 UTP6Q9NYH9 597 aaKnown RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 ZC3H7BQ9UGR2 993 aaKnown RBP15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 TAC3Q9UHF0 121 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 FBXO5Q9UKT4 447 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 B3GNT3Q9Y2A9 372 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 DHRS7Q9Y394 339 aa15.54■□□□□ 0.08
SNRPD3-204ENST00000439775 MAST4O15021 2626 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 NUP210LQ5VU65 1888 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 E7ENX8 843 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 MED26O95402 600 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 EZRP15311 586 aaKnown RBP15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 PGAM1P18669 254 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 GNLYP22749 145 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 SKIV2L2P42285 1042 aaKnown RBP15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 TAP2Q03519 686 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 CUL1Q13616 776 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 PRAMEF13Q5VWM6 474 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 ZNF425Q6IV72 752 aa15.53■□□□□ 0.08
SNRPD3-204ENST00000439775 FBXO42Q6P3S6 717 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms