RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PRPF4O43172 522 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDC7-203ENST00000428239 SIX3O95343 332 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 GNAZP19086 355 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 EEF1DP29692 281 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 AGTR2P50052 363 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 VSX2P58304 361 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 MAGOHP61326 146 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 ACY1Q03154 408 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ARHGAP19Q14CB8 494 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 DCAF12Q5T6F0 453 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 MFSD4BQ5TF39 518 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 WDR74Q6RFH5 385 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 SBSNQ6UWP8 590 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ADGRF3Q8IZF5 1079 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CENPLQ8N0S6 344 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 MREGQ8N565 214 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 C19orf47Q8N9M1 422 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 LINC01555Q8NAE3 123 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 BAHD1Q8TBE0 780 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 ACMSDQ8TDX5 336 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 NXPE2Q96DL1 559 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 NLNQ9BYT8 704 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SHCBP1LQ9BZQ2 653 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SEMA4BQ9NPR2 832 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 TOR4AQ9NXH8 423 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SENP1Q9P0U3 644 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 POMT2Q9UKY4 750 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SNX7Q9UNH6 387 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ACACAQ13085 2346 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SCN8AQ9UQD0 1980 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 HMX2A2RU54 273 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 GFYI3L273 518 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 IPO13O94829 963 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 TSPAN12O95859 305 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 NTRK1P04629 796 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 COL6A2P12110 1019 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CCNG1P51959 295 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CDH13P55290 713 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 TIAL1Q01085 375 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDC7-203ENST00000428239 DLG1Q12959 904 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 NAA25Q14CX7 972 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 PDK4Q16654 411 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ISCA2Q86U28 154 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 C17orf82Q86X59 251 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 PPP1R3BQ86XI6 285 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 METTL27Q8N6F8 245 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 OR2L3Q8NG85 312 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ZCCHC10Q8TBK6 192 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 AGR3Q8TD06 166 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 GRAMD1AQ96CP6 724 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 AIF1LQ9BQI0 150 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 NDC1Q9BTX1 674 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ULBP3Q9BZM4 244 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 UCK1Q9HA47 277 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 THSD1Q9NS62 852 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 FETUBQ9UGM5 382 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 IKZF3Q9UKT9 509 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 TNPO3Q9Y5L0 923 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 MYO1CO00159 1063 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CTIFO43310 598 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 RFPL1O75677 317 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CPA3P15088 417 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SLC26A3P40879 764 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CCR8P51685 355 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ASPHQ12797 758 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 SLC9A5Q14940 896 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDC7-203ENST00000428239 ZC3H12BQ5HYM0 836 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 TMPRSS9Q7Z410 1059 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ZNF655Q8N720 491 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 SLC5A11Q8WWX8 675 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 FBXL8Q96CD0 374 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 PDLIM5Q96HC4 596 aaKnown RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 APOPT1Q96IL0 206 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 FCRL4Q96PJ5 515 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 ASPSCR1Q9BZE9 553 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 POLR1BQ9H9Y6 1135 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 IGSF5Q9NSI5 407 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 STARD5Q9NSY2 213 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
CDC7-203ENST00000428239 OCIAD1Q9NX40 245 aa6.76□□□□□ -1.33
CDC7-203ENST00000428239 FEZF1A0PJY2 475 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 ANKDD1BA6NHY2 528 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 C1QAP02745 245 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 THRAP10827 490 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 GCAP28676 217 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 HMOX2P30519 316 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 PRDX1Q06830 199 aaKnown RBP6.75□□□□□ -1.33
CDC7-203ENST00000428239 CDC16Q13042 620 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 CHIT1Q13231 466 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 EIF3IQ13347 325 aaKnown RBP6.75□□□□□ -1.33
CDC7-203ENST00000428239 TRA2AQ13595 282 aaKnown RBP eCLIP6.75□□□□□ -1.33
CDC7-203ENST00000428239 C1orf189Q5VU69 101 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 KIAA1614Q5VZ46 1190 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 LRIG3Q6UXM1 1119 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 TDRPQ86YL5 185 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 KRT78Q8N1N4 520 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 TTC29Q8NA56 475 aaPredicted RBP6.75□□□□□ -1.33
CDC7-203ENST00000428239 TCP10LQ8TDR4 215 aa6.75□□□□□ -1.33
CDC7-203ENST00000428239 USP7Q93009 1102 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms